Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0218 ATGCTAATTTTTCTACATTTGGCAGGTTCAACTCATAAAGCAAGGATTGGCATTATAGTTAGAGTTATTGTAGCATTAGCGATTATTCTTTTTCTTGGTGGTTTGCTATTCTGCTACAAGGTTAAACACAAGGGTTTCAACCATGAAGTTTTCGTAGATGTGGCAGAGGAAGTCGATTGGCAGATAGCATTTAGTCAACTAAAAAGGTTCACAATGATGGAACTACAGATAGCTACAGACAACTTCAGTGAGAAAAATGTTTTGGGACAAGGAGGCTTTGGGAAGGTTTATAAAGGTATTCTCGTTGATAACACAAAGGTTGCTATCAAAAGGTTAACTGATTATGAAAACCCTGGGGGAGATGCAGCTTTCCAGCGTGAAGTCGAGATGATTAGTGTAGCTATCCACAGGAACCTATTACGGTTGATCGGGTTTTGTACAACTCCAACTGAGCGCCTTTTAGTTTATCCCTTCATGCCAAACTTAAGTGTTGCTTATCGTCTGCGAGAATGTAAACCATGGGAATCTGTTTTAGATTGGCCTACAAGAAAACTAGTGGCTCTAGGCACAGCCCGTGGCTTAGAATATCTTCATGAGCATTGCAATCCCAAGATTATCCATCGGGATGTCAAAGCAGCTAATGTATTACTAGATGAAGATTTTGAGGCAGTTGTTGGTGACTTTGGTTTGGCAAAGCTAGTTGATGTTCAAAGGACTAATGTGACTACTCAAGTTCGTGGGACAATGGGCCACATAGCTCCTGAATACTTGTCCACTGGGAAATCTTCAATAAGAACTGATGTTTTTGGTTACGGGATTATGCTTTTGGAGCTTGTTTCAGGCCAACGGGCAATTGACTTTTCTCGCTTTGAGGAGGAAGATGATGTGCTATTGCTTGACCATGTTAAGAAATTAGAACGTGAGAAAAAACTAGATGATATAGTTGACCGCAATCTAGATAAACATTACGACCTACAAGAGGTTAAATTGATGGTACAAGTTGCATTACTGTGCACACAAGCATCCCCAGACAACCGTCCAGCAATGTCTGAAGTAGCAAGAATGCTAGAAGGAGAAGGGCTTGTTGAAAGGTGGGAGGAATGGGAGCATGTGGAGGCAACTCGGAGCCAAGAACACGAGAGACTACAAAGAAGATTAAATTGGGGAGACAATTCAGTTAACAAACAAAATGCCATTGAGTTGTCTGGCGGGAGATGA 1218 0.413 MLIFLHLAGSTHKARIGIIVRVIVALAIILFLGGLLFCYKVKHKGFNHEVFVDVAEEVDWQIAFSQLKRFTMMELQIATDNFSEKNVLGQGGFGKVYKGILVDNTKVAIKRLTDYENPGGDAAFQREVEMISVAIHRNLLRLIGFCTTPTERLLVYPFMPNLSVAYRLRECKPWESVLDWPTRKLVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVQRTNVTTQVRGTMGHIAPEYLSTGKSSIRTDVFGYGIMLLELVSGQRAIDFSRFEEEDDVLLLDHVKKLEREKKLDDIVDRNLDKHYDLQEVKLMVQVALLCTQASPDNRPAMSEVARMLEGEGLVERWEEWEHVEATRSQEHERLQRRLNWGDNSVNKQNAIELSGGR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0218 405 FunFam Somatic embryogenesis receptor kinase 1 51 158 - -
Bisa04g0218 405 Pfam Protein kinase domain 83 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0218 405 FunFam Somatic embryogenesis receptor-like kinase 1 159 376 - -
Bisa04g0218 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bisa04g0218 405 SUPERFAMILY Protein kinase-like (PK-like) 60 357 IPR011009 -
Bisa04g0218 405 Gene3D Transferase(Phosphotransferase) domain 1 159 376 - -
Bisa04g0218 405 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 64 367 - -
Bisa04g0218 405 ProSiteProfiles Protein kinase domain profile. 82 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0218 405 SMART serkin_6 82 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0218 405 Gene3D Phosphorylase Kinase; domain 1 51 158 - -
Bisa04g0218 405 ProSitePatterns Protein kinases ATP-binding region signature. 88 110 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0218 Bisa-ChrBisa04 4187380 4190889 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0218 8 405 Receptor kinase-like Gene Family AT5G10290 77.193 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa04g0218 Pkinase 4.4e-41 CL0016