Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0213 ATGGTGTCCAAATCATGTTGGAAACTCTTATTCTTTTGTGTCTCTGTAATACTCTCTCCATCTCAAGTTGCTACCAAAGATGGTGAAGCAGATGCCCTGTTGAAGTGGAAAGCAAGCCTTGATAATCAAAGCCAAGCGACCTTGTCTTCTTGGAATTACGGTACTAGTCCTTGCAAAGGACACTGGAAAGGAGTCACATGTGATGAATCCATGTCTATTTCGATGATCAATCTTACAAGTTTGGGTATGAAAGGTACACTTCAGGCTCTCAACTTCTCATCCTTCCCTAACCTCCATGTTTTAGATATAAGTTATAACCAGTTTTATGGAGCTATTCCTCCCCAAATTGGTAACTTGTCAACTATTTTTTATTTGAGCATGTATTCTAACCAATTTACTGGTTTCATACCTCAAGAAATATGGGCATTAAGCACTCTCAACTTTCTTGATTTTGGTGTGTGTTATCTCACTGGGGAAATTCCTGAGGAAATTGGGAATTTGAGGAATCTAACATCTTTACGTCTTGGCGGAACCTTAGGCTATGCTGCTCCAGAGATTGCTTTCACTATGCAAGTGAATGAGAAATGTGATGTTTATAGCTTTGGAGTTCTTACTTTGGAAATCCTCATGGGGAAGCATCCGGGAGAGCTTATTGATTCTTTGACGAAGTCTTCAACAACCTATAATTTGTCATTAAAAGATGTGTTGGACCAGCGACTTCCTCAACCCTCCAACCTAGTTCTTAAGGAAGTGATGTTGACTGCCAAACTAGTATTTGCTTGCTTGAACCAAAATCCATCTTCACGTCCAACGATGAGTCAAGTATCCGCGGAGCTTGCAAAGGCAAAACCTTTTGTAGGGAACTTTGAAACCATTACACTTGGACAGCTTATGGAATATTGA 903 0.4009 MVSKSCWKLLFFCVSVILSPSQVATKDGEADALLKWKASLDNQSQATLSSWNYGTSPCKGHWKGVTCDESMSISMINLTSLGMKGTLQALNFSSFPNLHVLDISYNQFYGAIPPQIGNLSTIFYLSMYSNQFTGFIPQEIWALSTLNFLDFGVCYLTGEIPEEIGNLRNLTSLRLGGTLGYAAPEIAFTMQVNEKCDVYSFGVLTLEILMGKHPGELIDSLTKSSTTYNLSLKDVLDQRLPQPSNLVLKEVMLTAKLVFACLNQNPSSRPTMSQVSAELAKAKPFVGNFETITLGQLMEY 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0213 300 SUPERFAMILY L domain-like 28 179 - -
Bisa04g0213 300 Pfam Protein kinase domain 149 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0213 300 Gene3D Transferase(Phosphotransferase) domain 1 142 290 - -
Bisa04g0213 300 PANTHER LEUCINE RICH REPEAT KINASE 2 52 176 - -
Bisa04g0213 300 SUPERFAMILY Protein kinase-like (PK-like) 149 277 IPR011009 -
Bisa04g0213 300 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
Bisa04g0213 300 SMART serkin_6 42 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0213 300 ProSiteProfiles Protein kinase domain profile. 1 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0213 300 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Bisa04g0213 300 FunFam Nuclear pore complex protein NUP107 26 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0213 Bisa-ChrBisa04 3854276 3857360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0213 94 234 Receptor kinase-like Gene Family AT4G08850 32.867 2.35e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa04g0213 PK_Tyr_Ser-Thr 1.3e-10 CL0016