Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0200 ATGGCTTCTTCAAGTGGGACATCTTCAGGGTCATTGTCTCTGGCTCAAACCTCTGGTTCGGAGGAGGATTTGCAGGCCTTGATGGACCAGAGGAAGAGGAAGAGGATGATATCGAACCGCGAGTCGGCGAGGAGGTCGAGGATGAGGAAGCAGAAGCATCTGGACGATCTTATGGCTCAGGTGGCTCAGCTCAGGAATGAGAATCAAGAGATTCTGACACGTGTCAACCTCACCTCCCAGCAATACATCGCCATCGAAGCAGACAACTCTGTGCTCCAAGCTCAGGCCAATGAACTCAGCCACAGATTGCAGTCTCTGAATGAGATTGTGGATTTCCTCAATGCCACAACTTCTGTGAACTTTGGAGCTATGAATATGAACATGAACACCTTCATTGAGCCCACCAATAATAGCTTCTTCAATAGCATGGCCATGGCTTACCTGAACCAGCCCATCATGGCTTCTCCAGACATGTTTCAGTGCTGA 486 0.4938 MASSSGTSSGSLSLAQTSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLMAQVAQLRNENQEILTRVNLTSQQYIAIEADNSVLQAQANELSHRLQSLNEIVDFLNATTSVNFGAMNMNMNTFIEPTNNSFFNSMAMAYLNQPIMASPDMFQC 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0200 161 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Bisa04g0200 161 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 156 - -
Bisa04g0200 161 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Bisa04g0200 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Bisa04g0200 161 FunFam BZIP transcription factor 29 80 - -
Bisa04g0200 161 Pfam bZIP transcription factor 31 80 IPR004827 GO:0003700|GO:0006355
Bisa04g0200 161 Coils Coil 47 81 - -
Bisa04g0200 161 MobiDBLite consensus disorder prediction 1 24 - -
Bisa04g0200 161 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Bisa04g0200 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Bisa04g0200 161 MobiDBLite consensus disorder prediction 25 50 - -
Bisa04g0200 161 MobiDBLite consensus disorder prediction 1 50 - -
Bisa04g0200 161 Coils Coil 89 116 - -
Bisa04g0200 161 Gene3D - 29 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0200 Bisa-ChrBisa04 3410482 3410967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0200 25 157 bZIP Transcription Factor Family AT4G34590 57.037 1.10e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bisa04g0200 bZIP_1 2.8e-10 CL0018