Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0191 ATGGCAACTTATTTGCCAACTTCATATTCCGAGACATCGATTGCTCCTAGTAATATAACGTCATACATGAACTCTAGTTCATATCCAGATGTGTTCCCTGGCAATTCTCAGGAGCAAAATAACTGCTTTGTGATCCCATCATTAAGTTCTTCTCATTCAACTCCTGAACAGCAAGAAATCTTAGCAAATCTTGGTGGTTTGCAAACTGGGGACCATGATTTAACCGCATGGAGAGAGGGTAGAACTGAGATGCTAGTCACACATCCAATGGATGGCCGGAACTTGCAGGTTCAGGGATTATCTCTCAGCCTCGGAACCCAAATACCATCTGGAATCCACATGCCTCCTTTTCATGATCGAAGTTCTAATCTGAGTTTTGATTCGTTTTTAGGTCCAAATCCATCAATTTCAGGCCATAAAAATGGCTCATCTAGACATGAATGTTTGGGGCACTCTGAAATGTTGCCACCTGATTTGCTTGAATGTGATCGACATTTGAATAGAGATTGGGATGGATTGTCAAGCATTGCTAGAACCAGTCCTAGTTCCAAGTACCTCAGGGCAGCACAAGAGCTACTCGATGAAGTTGTTGACATCCAAAAAGCTATAAAACAACCTAGCATGAAGAGTCATAGCACACATGAAATCCCAAAATATACTTCCAAGGAGGATGATGGGAGGCTAGAAAATGAAAAGGCACCTGCAAATGGAGTGCTTAACCCTCAAGATTCAGCTAGTAACTCTTCTTGTGAGCTTTCACACATAGAAAAACAAGATCTGCAGAACAAGTTAACAAAGCTTCTGTCAATGCTTGATGAGGTCGACCATAGGTACAAGCAATATTATCATCGGATGCAGATTGTGGTATCATCATTTGATGTGATAGCAGGACGCGGGGCAGCTAAACCATACACAGCACTTGCTCTTCAAACCATTTCACGCCATTTTCGGTGCCTGCGTGATGCAATCACTGGCCAAATCAGTGCAACACAAAAGAGTCTTGGAGAGCAAGATGCTTTGGGAAATCATAAAGGAGTTGGAATATCAAGACTTCGGTATGTGGACCAACAAATCCGGCAACAAAGGGCACTCCAGCAACTCGGTGTGATGCAACATGCATGGAGGCCACAAAGGGGACTGCCTGAAAGCTCCGTTTCAATTCTTCGTGCTTGGCTGTTTGAACATTTCCTTCATCCGTATCCAAAAGATTCTGATAAGATCATGCTAGCAAGGCAGACAGGCTTGACTAGAAGTCAGGTCTCAAACTGGTTTATAAATGCACGTGTGCGTCTATGGAAACCTATGATTGAGGAGATGTACAAGGAAGAGAACAACGATGCTGACATGGACTCCAGTTCTTCATCTGAAAATGCATCCAAGGTAACAAAAACTGATGTCAAGGCCTCTGATGATTGGTGCGATGATTTGCAGCAGAGTCAATGCTCAGTAGCCAACAAGAATTCCAATGATGGACAAGCTAAGGACTCCAGACCTGATAACATTCTTGATGCGGAAATCATGGGATCAGGTAACGAGGATGAAACCGAATATGGGAATGGGATGGTAAAGCAAGCTGAGGAGCAAAGGCCCAACTTTGATTATTGTGGTCTCTACCCGGATGAAACAGTTGTTCAATGTGGCGGAGTTACTTCCAGGTTTATGGCGGTTGCTCCGTCGTGCCAAATGCCAGAGTTGGGAAGGTTTGAGACCGGGAATGGAGTATCACTGACGTTAGGTTTGCAACATTCTGACGATGGTGATTTTATGTCTGGTGAGACCAATCATAGTTTTGTTGTCATGAGGGAGGATGGCATTTACAATGCTGCTTCAGCTTCCACAATTGGAGCTGAGACATCGGAACTTGAATGTGTGGGTGCTGGAAACCAGCAGCAAAAACGGTTTGGTTCAGCCCATTTATTACATGATTTTGTAGTATAA 1938 0.437 MATYLPTSYSETSIAPSNITSYMNSSSYPDVFPGNSQEQNNCFVIPSLSSSHSTPEQQEILANLGGLQTGDHDLTAWREGRTEMLVTHPMDGRNLQVQGLSLSLGTQIPSGIHMPPFHDRSSNLSFDSFLGPNPSISGHKNGSSRHECLGHSEMLPPDLLECDRHLNRDWDGLSSIARTSPSSKYLRAAQELLDEVVDIQKAIKQPSMKSHSTHEIPKYTSKEDDGRLENEKAPANGVLNPQDSASNSSCELSHIEKQDLQNKLTKLLSMLDEVDHRYKQYYHRMQIVVSSFDVIAGRGAAKPYTALALQTISRHFRCLRDAITGQISATQKSLGEQDALGNHKGVGISRLRYVDQQIRQQRALQQLGVMQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEENNDADMDSSSSSENASKVTKTDVKASDDWCDDLQQSQCSVANKNSNDGQAKDSRPDNILDAEIMGSGNEDETEYGNGMVKQAEEQRPNFDYCGLYPDETVVQCGGVTSRFMAVAPSCQMPELGRFETGNGVSLTLGLQHSDDGDFMSGETNHSFVVMREDGIYNAASASTIGAETSELECVGAGNQQQKRFGSAHLLHDFVV 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0191 645 CDD homeodomain 374 435 IPR001356 GO:0003677
Bisa04g0191 645 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 65 457 - -
Bisa04g0191 645 MobiDBLite consensus disorder prediction 444 463 - -
Bisa04g0191 645 SUPERFAMILY Homeodomain-like 375 442 IPR009057 -
Bisa04g0191 645 Pfam Homeobox KN domain 391 430 IPR008422 GO:0003677|GO:0006355
Bisa04g0191 645 FunFam BEL1-like homeodomain protein 4 377 439 - -
Bisa04g0191 645 Pfam Associated with HOX 182 324 IPR006563 -
Bisa04g0191 645 SMART prehox3 174 325 IPR006563 -
Bisa04g0191 645 Coils Coil 257 277 - -
Bisa04g0191 645 MobiDBLite consensus disorder prediction 205 252 - -
Bisa04g0191 645 ProSiteProfiles 'Homeobox' domain profile. 371 434 IPR001356 GO:0003677
Bisa04g0191 645 MobiDBLite consensus disorder prediction 237 252 - -
Bisa04g0191 645 MobiDBLite consensus disorder prediction 484 517 - -
Bisa04g0191 645 MobiDBLite consensus disorder prediction 215 231 - -
Bisa04g0191 645 SMART HOX_1 374 438 IPR001356 GO:0003677
Bisa04g0191 645 Gene3D - 370 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0191 Bisa-ChrBisa04 3259962 3263287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0191 27 645 Homeobox Transcription Factor Family AT4G34610 42.968 9.72e-132 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa04g0191 POX 8.4e-48 No_clan