Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0189 ATGGCTAAACCGAAGGCTCCGAGGCGAACCCTAGAGTCATACACAGTCAAGCACATAAACAAAACAGTTAGAGCCGGCGACTGCGTTCTAATGCGGCCGTCCGAGCCGTCAAAGCCTTCCTATGTGGCTAGGATCGAGCGGATCGAAGCCGACTCGCGAGGCGCCAACGTCAAGGTTCACGTCCGTTGGTACTACCGGCCGGAGGAGTCCATCGGTGGCCGTCGCCAGTTCCACGGCTCTAAGGAAGTTTTCCTCTCTGATCACTTTGATGTTCAGAGCGCTGACACTATCGAAGGCAAGTGTACGGTTCACAGTTTTAAGGGCTACACGAAGCTCGATGCAGTTGGAAACGACGATTTCTTCTGCCGCTTCGAATACAATTCCGCCACCGGAGCTTTCAATCCTGATAGAGTCGCCGTGTATTGTAAATGTGAGATGCCCTACAACCCCGATGATCTAATGGTCCAGTGTGAAGGCTGTAGTGATTGGTTTCATCCTGCTTGTATAGACATGACTGTGGAGGAGGCCAAAAGACTTGACCACTTCTATTGTGAAAGTTGTTCTGCTGAAGATCAAAATAAGTTGCAAAATTCTCATTCTGCTTCAAGACACTCAGAGACAAAGGTCGATACAAAACGCCGTAGAAGATCCCCCCTCTCCTCTTCTCTTCTGTTCCTTGTTCTTACTAGGACTTTTTTTCCTGTGGTTATGAATGATTAA 720 0.4889 MAKPKAPRRTLESYTVKHINKTVRAGDCVLMRPSEPSKPSYVARIERIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEGKCTVHSFKGYTKLDAVGNDDFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLDHFYCESCSAEDQNKLQNSHSASRHSETKVDTKRRRRSPLSSSLLFLVLTRTFFPVVMND 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0189 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 206 IPR013083 -
Bisa04g0189 239 FunFam Chromatin remodeling protein EBS 1 133 - -
Bisa04g0189 239 SUPERFAMILY FYVE/PHD zinc finger 131 191 IPR011011 -
Bisa04g0189 239 ProSitePatterns Zinc finger PHD-type signature. 142 187 IPR019786 -
Bisa04g0189 239 SMART BAH_4 21 137 IPR001025 GO:0003682
Bisa04g0189 239 Pfam PHD-finger 141 189 IPR019787 -
Bisa04g0189 239 ProSiteProfiles BAH domain profile. 21 137 IPR001025 GO:0003682
Bisa04g0189 239 ProSiteProfiles Zinc finger PHD-type profile. 139 190 IPR019787 -
Bisa04g0189 239 PANTHER OS08G0421900 PROTEIN 5 208 - -
Bisa04g0189 239 Pfam BAH domain 22 136 IPR001025 GO:0003682
Bisa04g0189 239 SMART PHD_3 141 188 IPR001965 -
Bisa04g0189 239 FunFam Bromo-adjacent homology (BAH) domain-containing protein 134 204 - -
Bisa04g0189 239 MobiDBLite consensus disorder prediction 195 214 - -
Bisa04g0189 239 Gene3D - 2 133 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0189 Bisa-ChrBisa04 3223486 3227748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0189 41 139 Core DNA Replication Machinery Family AT4G14700 30.303 6.54e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa04g0189 BAH 1.5e-22 No_clan