Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0179 ATGCAGAGGTCTAGACCGATTCCTTTGAATTGGAGAAGGAGATTTAATAATGAATTGCAGTTTGATCCATGGCACAGGACTCAATTTGTTACTTTCTTTGTCTTGAAAGATTATGGAGAATTGGCTTTAACTGTAATGAGCATGGTGGATGGCTTGGTGCATAAGACCAATGAAAAGATAGAGTCTGCTACAGATGTCCTCAAGGGCATACTAAAACCTGTGGTCGATGACGATGAAGAGATTCCTTGGCCTCCCAGAGATCCTCAGGCACTTGCACTGATGGAAGAAGAAATAAGTCAAAGGGAACAAGAAGGGCAACTGGATGAAGGGTTCCTTGCAGAAGTTAGTGCACAACTACGACAGCATATTGTACAAGTTTTAAGGCTTCATCCCTCACTTCCATTTTCTTCCATTGCAATCAGCTCCTTGCCTGAGTCCCTTCAACTTATGGGTTTGAGAAACAGTCTGGATAGGTTTTTATCATCTTGGAAAAGCGCAAATGATCCTGGTCGAGGAGAGTATGCAGTTAGAATAGACCTTCGAGGCTATCCACAGTTAGTTCAAATGAAGGGAAGTGTTATAAATACTAGAGAAGGTTTATGGACTGGCGTTACTTTTACTGGGAATCCAGCTCAAAAGTCGAATTCAGTATATAAATATGAATTTGTGTTCAATGAGAAAGAGAAGAAATTATTGTTTAAAACCGAAGTTGATGATCAGCCATATTCTTCATTACAAGATCATGCTGCAAACCATCGTCATGGGAACCTAAACAAGAAATCAATAGTAGGAATAGGAGTTGGCTCTTCATTATTGGTGACGGTCTTGATAACTCTGTGGCTTTCAAGAGATATATGGAAAAAGAAACTTCGAAAAACAGGGATGGCAAGAATATTTTACTTGAAGCGTTCTAAGAGGAAACTTAGGAAGGAAGACATGGATCTGCCAACATTTGATTTGTCAATCATAGCTGAAGCTACTGATAATTTTTCAGTCAATAATAAATTGGGAGAAGGCGGATTTGGACTAGTTTACAAGGGTACTTTGGCAAATGGGCAAGAGATAGCTGTAAAAAGGTTATCCACAAAATCGTGTCAAGGATTGGTAGAGTTTAAAAATGAAGTTGTGTTGATCACCAAACTTCAACACCGTAATCTTGTGAAGCTTCTAGGTTGCTGCATTCAAGGAGAGGAAAAAATGCTGATCTATGAATACATGCCTAACAAGAGCTTGGATTACTTTATTTTTGGTAAAACTAGAAGCAAGCTGTTGGATTGGCTCAAGCGTTTCCAGATTATTGTCGGCATTGCTCGAGGGCTTCTATATCTTCATCAAGATTCTCGATTGAGAATTATTCACAGAGATCTTAAAGCTAGCAATGTTCTACTGGATGCCCATATGAATCCAAAAGTTTCAGACTTTGGCCTGGCTCGAGCTTTTGGGGAAGATCAAGTTAAAGGAAATACTAATAGAGTTGTTGGAACATATGGTTACATGGCTCCTGAATATGCTGTGCATGGGCATTTCTCAGTGAAATCTGATGTGTTTAGTTTTGGCGTAATAATACTGGAGATAATTAGTGGAATGAAGAATAGGGAATTTTCTGACCCAGAAGACAACCTTAATCTTCTTGGATATGCATGGAGGCTCTGGAATGAAGAGAGACCATTGGAAATTATAGATAAATTCATAGGTGAAAAATACATTGCTTCTGAAGTCATACGATGCATACATGTAGGATTGTTATGCGTACAACAAAAACCAGAAGACAGGCCAAACATGTCTTCAGTGGTTCTTATGTTGAATGGTGAGAAGTTGTTGCCAAAGCCAAAGGCCCTTGGATTTTACGCTGGAAGAGATTTATCGGAGGCAGATTCTTCATCTAGAAAGTGCAATCAGTTTTCCCCAAATGAGATGTCTCTTAGTGTGCTAGAAGCAAGATAG 1944 0.3925 MQRSRPIPLNWRRRFNNELQFDPWHRTQFVTFFVLKDYGELALTVMSMVDGLVHKTNEKIESATDVLKGILKPVVDDDEEIPWPPRDPQALALMEEEISQREQEGQLDEGFLAEVSAQLRQHIVQVLRLHPSLPFSSIAISSLPESLQLMGLRNSLDRFLSSWKSANDPGRGEYAVRIDLRGYPQLVQMKGSVINTREGLWTGVTFTGNPAQKSNSVYKYEFVFNEKEKKLLFKTEVDDQPYSSLQDHAANHRHGNLNKKSIVGIGVGSSLLVTVLITLWLSRDIWKKKLRKTGMARIFYLKRSKRKLRKEDMDLPTFDLSIIAEATDNFSVNNKLGEGGFGLVYKGTLANGQEIAVKRLSTKSCQGLVEFKNEVVLITKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDYFIFGKTRSKLLDWLKRFQIIVGIARGLLYLHQDSRLRIIHRDLKASNVLLDAHMNPKVSDFGLARAFGEDQVKGNTNRVVGTYGYMAPEYAVHGHFSVKSDVFSFGVIILEIISGMKNREFSDPEDNLNLLGYAWRLWNEERPLEIIDKFIGEKYIASEVIRCIHVGLLCVQQKPEDRPNMSSVVLMLNGEKLLPKPKALGFYAGRDLSEADSSSRKCNQFSPNEMSLSVLEAR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0179 647 Gene3D Transferase(Phosphotransferase) domain 1 406 608 - -
Bisa04g0179 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Bisa04g0179 647 SUPERFAMILY Protein kinase-like (PK-like) 313 608 IPR011009 -
Bisa04g0179 647 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0179 647 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 295 405 - -
Bisa04g0179 647 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Bisa04g0179 647 CDD STKc_IRAK 336 603 - -
Bisa04g0179 647 Pfam Protein tyrosine and serine/threonine kinase 332 599 IPR001245 GO:0004672|GO:0006468
Bisa04g0179 647 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 185 646 - -
Bisa04g0179 647 ProSiteProfiles Protein kinase domain profile. 330 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0179 647 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 406 609 - -
Bisa04g0179 647 Gene3D Phosphorylase Kinase; domain 1 303 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0179 Bisa-ChrBisa04 3081563 3093077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0179 246 616 Receptor kinase-like Gene Family AT4G23190 51.316 1.92e-132 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa04g0179 PK_Tyr_Ser-Thr 1.1e-47 CL0016