Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0178 ATGAAGATACAGTGTGATGTGTGTGAGAGAGAGGAGGCGGCTCTGTTCTGTCCTTCCGATGAGGCAGCCCTATGCGACGGCTGTGATCGCACCATCCACCACGCCAACAAGCTCGCAATAAAGCACTCTCGCATCTCTCTCCACCATCCCAACCCTAATGCCTATCCTCTCTGCGATATCTGCCACGAAAAGCGAGCATATGTATTTTGCCAAGAAGACAGAGCAATAGTTTGCAGTGACTGTGACCTTCATATCCACAGAGCCAACGAACACACTCAGAAGCATAACAGGTTTCTTCTCACAGGCATGAAGCTTTCTCCTTCTGTTTTAGACTCTGATTCTGAAGTAAGAAGCCATGATCACATAAACACAGACAGATCATCAGTTTGTAGTCAAAATTCCACTTCTTCTTCTTCGTCTTCTTCAATTGTGAATAATAATTATTTAGCCTCAGATCAGTACATGTTTAGTGACAGCAATTCAGTTTCAACAAGCAGCATTTCTGAGTACTTGATTCAGACCATACCTGGTTTTTGCTTTGAAGACCTTCTTGATGCTTCATTTCCTCCATAA 573 0.4363 MKIQCDVCEREEAALFCPSDEAALCDGCDRTIHHANKLAIKHSRISLHHPNPNAYPLCDICHEKRAYVFCQEDRAIVCSDCDLHIHRANEHTQKHNRFLLTGMKLSPSVLDSDSEVRSHDHINTDRSSVCSQNSTSSSSSSSIVNNNYLASDQYMFSDSNSVSTSSISEYLIQTIPGFCFEDLLDASFPP 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0178 190 MobiDBLite consensus disorder prediction 125 142 - -
Bisa04g0178 190 CDD Bbox1_BBX-like 5 47 - -
Bisa04g0178 190 CDD Bbox1_BBX-like 57 100 - -
Bisa04g0178 190 Gene3D Classic Zinc Finger 1 100 - -
Bisa04g0178 190 MobiDBLite consensus disorder prediction 114 142 - -
Bisa04g0178 190 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bisa04g0178 190 Pfam B-box zinc finger 4 46 IPR000315 GO:0008270
Bisa04g0178 190 Pfam B-box zinc finger 55 92 IPR000315 GO:0008270
Bisa04g0178 190 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bisa04g0178 190 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 186 - -
Bisa04g0178 190 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bisa04g0178 190 SMART bboxneu5 53 100 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0178 Bisa-ChrBisa04 3056504 3058627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0178 1 189 C2C2-CO-like Transcription Factor Family AT1G75540 49.000 4.18e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bisa04g0178 zf-B_box 2.3e-07 No_clan