Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0163 ATGCGACCACTTTGTGACGTTTGTGAGAGTGCTGCTGCGATATTCTTCTGCGCTGCAGACGAGGCTGCTTTATGCCGTGCATGCGACGACAAGGTCCATACATGCAACAAGCTTGCAAGTAAACATGTGCGGGTTGGGCTCGCAGACCCCACTGATGTTCCTCGCTGTGACATATGTGAAAATGCACCTGCTTTCTTTTACTGCGAGATAGATGGTAGTTCACTGTGCCTGCAATGTGACATGATAGTGCATGTTGGTGGTAAAAGAACCCATGAAAGATATCTTCTGTTGAGGCAGAGAGTAGAGTTTTCCAGTGACAAACCCGGGCGATTGGAGGAACTAGGGCTTGAATTAAGAAAGGACCAAAATCAGGCACATAAGCTAATAACAAGAGATGGTCAGCAGAACCACAGGGTCTCAATGCTAGAAAATAATGTTGATGGTCATGGACAGATGGATAAAAAATTAATTGATCTTAATACTAGGCCACAACGGTTAAATGGACCAGCATCAAACAATCAGGAACTGGGTTTGGATATTTCAAGTGGCAATAACAATAAATCTGCAAGTGTGGTACCAGTAGAACCCTTCAAACGAGAGGCTAAGAAGCAATGA 615 0.4439 MRPLCDVCESAAAIFFCAADEAALCRACDDKVHTCNKLASKHVRVGLADPTDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHERYLLLRQRVEFSSDKPGRLEELGLELRKDQNQAHKLITRDGQQNHRVSMLENNVDGHGQMDKKLIDLNTRPQRLNGPASNNQELGLDISSGNNNKSASVVPVEPFKREAKKQ 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0163 204 Gene3D Classic Zinc Finger 2 95 - -
Bisa04g0163 204 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Bisa04g0163 204 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Bisa04g0163 204 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 160 - -
Bisa04g0163 204 CDD Bbox1_BBX-like 56 96 - -
Bisa04g0163 204 MobiDBLite consensus disorder prediction 162 204 - -
Bisa04g0163 204 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bisa04g0163 204 FunFam B-box zinc finger protein 19 2 92 - -
Bisa04g0163 204 MobiDBLite consensus disorder prediction 164 191 - -
Bisa04g0163 204 CDD Bbox1_BBX-like 4 47 - -
Bisa04g0163 204 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Bisa04g0163 204 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bisa04g0163 204 SMART bboxneu5 51 96 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0163 Bisa-ChrBisa04 2742352 2744079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0163 1 203 C2C2-CO-like Transcription Factor Family AT4G38960 62.562 2.31e-86 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bisa04g0163 zf-B_box 3.2e-06 No_clan