Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0154 ATGAATGGAAAAGGGCCCAAGGCCCATAAGCTTCATGCATTTTACCAGTATTATTCGGATTTATACCCGGACCAAAAGAATGACCCGGAACATCTAATTATAAAATCAATGAACAATTATCACCCACGTCGTTCTTCCCTCATCTGCAACATAATAATTCGCAGAGAGAGCGAGAAAGATCGGAACTTCGAAGATCTCTCAGAAAAATTCAGATTTTCAGATCTCTCGTACGTCTTTGTAGATCCGTTGCCTATAATGACTGCGTTCAGTGGCGATGAGACGGCACCGTTTTTCGGCTTTCTCGGAGCCGCAGCTGCCCTGGTTTTCTCCTGTATGGGAGCTGCCTATGGCACAGCAAAGAGTGGCGTAGGTGTGGCTTCAATGGGTGTGATGAGACCTGAGTTGGTGATGAAGTCCATTGTTCCTGTGGTTATGGCTGGAGTGTTGGGTATTTATGGCCTCATTATTGCTGTTATTATCAGTACTGGCATAAATCCTAAGGCCAAATCTTACTACCTCTTTGATGGTTATGCACATCTCTCCTCTGGTCTTGCCTGTGGGCTGGCTGGGCTTTCTGCTGGCATGGCTATTGGTATTGTTGGTGATGCTGGTGTTAGAGCTAATGCCCAGCAGCCTAAACTCTTTGTTGGAATGATTCTTATTCTCATTTTCGCTGAAGCTCTTGCCCTCTATGGTCTTATAGTTGGCATTATCCTGTCTTCTCGTGCTGGCCAGTCCAGAGCTGAGTAG 750 0.4587 MNGKGPKAHKLHAFYQYYSDLYPDQKNDPEHLIIKSMNNYHPRRSSLICNIIIRRESEKDRNFEDLSEKFRFSDLSYVFVDPLPIMTAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0154 249 CDD ATP-synt_Vo_c_ATP6C_rpt2 173 240 - -
Bisa04g0154 249 SUPERFAMILY F1F0 ATP synthase subunit C 98 161 IPR035921 -
Bisa04g0154 249 Gene3D - 95 246 IPR035921 -
Bisa04g0154 249 NCBIfam V-type ATPase subunit C 97 205 IPR011555 GO:0033179|GO:0046961|GO:1902600
Bisa04g0154 249 PRINTS Vacuolar ATP synthase 16kDa subunit signature 218 241 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bisa04g0154 249 PRINTS Vacuolar ATP synthase 16kDa subunit signature 191 217 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bisa04g0154 249 PRINTS Vacuolar ATP synthase 16kDa subunit signature 114 138 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bisa04g0154 249 PRINTS Vacuolar ATP synthase 16kDa subunit signature 140 164 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bisa04g0154 249 CDD ATP-synt_Vo_c_ATP6C_rpt1 97 164 - -
Bisa04g0154 249 Pfam ATP synthase subunit C 101 160 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bisa04g0154 249 Pfam ATP synthase subunit C 181 239 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bisa04g0154 249 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 88 245 - -
Bisa04g0154 249 FunFam V-type proton ATPase proteolipid subunit 95 246 - -
Bisa04g0154 249 SUPERFAMILY F1F0 ATP synthase subunit C 171 240 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0154 Bisa-ChrBisa04 2531907 2533669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0154 86 249 Primary Pumps ATPases(2) AT2G16510 98.780 2.14e-110 313