Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0110 ATGAAGGACTTCTGCAAGTGGCAACATGAAGGATTTCAGAGGACTGAAGTCCAGCTTATGGATTCTACAGCTACTAGGAAAACTCAAAAGGCTGACAGAGAAAAATTGAGGAGGGATCGGCTCAATGAACAATTTGTAGAACTGGGCAGCATTTTAGACCCTGATAGGCCCAAGAATGACAAAGCAACCATTCTTACTGATACAATTCAATTGCTGAAGGACCTTACTTCTCAAGTTAATAAGCTTAAAGATGAATATGCTATGCTGACTGAAGAATCCCAAGAGTTGACACAGGAGAAAAATGATCTTAGAGAAGAGAAGGCTTCTCTTAAATCAGATATTGAGAGCTTGAATAATCAGTATCAGCAACGACTCAGGACTATGTTCCCATGGACTGCAATGGACCACTCAGTTATGATGGCTCCACCACCTTCATATCCATATCCAATGCCAGTGCCAGTCGCAGTCCCTCCTGGTCCAATTCCCATGCATCCACCCATGCAGCCATACCCCTACTTTACAAATCAAAATCCCGGGGTCATCCCAAATCCCTGTTCAACATTTGTTCCTTATTTAGCTCCTAACACTCTTGTTGAACATCAATCCACACAATATGTATCCCCACCACTTCATCCAGGTAACCATACCCATGCGTCAGGCACACAAGATTCCAGAAACAAATCATCCAGGGAGAGCAAGGCTGAAAATAATGAAGGTGCTAATAATGATGTCACCACAGACCTGGAGTTGAAGACTCCTGGATCTTCTTCAGATCAGGAGTTATCATCCGAGCAAAGAAGATCCAGCAAGTTATCCATGAAGGAAGGCAGTTGCACAGAGGGCAGTTTATCTGGTAGGTGTTCTTCATCCCATAGCGTACAGGATAGCTCATCAAGTAGTGTAGTTGGCAGCAGAAAAGCTGATGAATGA 930 0.4355 MKDFCKWQHEGFQRTEVQLMDSTATRKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILTDTIQLLKDLTSQVNKLKDEYAMLTEESQELTQEKNDLREEKASLKSDIESLNNQYQQRLRTMFPWTAMDHSVMMAPPPSYPYPMPVPVAVPPGPIPMHPPMQPYPYFTNQNPGVIPNPCSTFVPYLAPNTLVEHQSTQYVSPPLHPGNHTHASGTQDSRNKSSRESKAENNEGANNDVTTDLELKTPGSSSDQELSSEQRRSSKLSMKEGSCTEGSLSGRCSSSHSVQDSSSSSVVGSRKADE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0110 309 PANTHER TRANSCRIPTION FACTOR BHLH121 9 307 IPR044579 GO:0003700|GO:0006879
Bisa04g0110 309 MobiDBLite consensus disorder prediction 205 223 - -
Bisa04g0110 309 MobiDBLite consensus disorder prediction 205 309 - -
Bisa04g0110 309 Coils Coil 65 127 - -
Bisa04g0110 309 MobiDBLite consensus disorder prediction 238 262 - -
Bisa04g0110 309 Pfam Helix-loop-helix DNA-binding domain 26 75 IPR011598 GO:0046983
Bisa04g0110 309 Gene3D - 23 103 IPR036638 GO:0046983
Bisa04g0110 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 96 IPR036638 GO:0046983
Bisa04g0110 309 Coils Coil 24 44 - -
Bisa04g0110 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 25 75 IPR011598 GO:0046983
Bisa04g0110 309 SMART finulus 31 81 IPR011598 GO:0046983
Bisa04g0110 309 MobiDBLite consensus disorder prediction 274 309 - -
Bisa04g0110 309 CDD bHLH_AtILR3_like 30 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0110 Bisa-ChrBisa04 1728873 1731589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0110 16 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 64.228 1.20e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa04g0110 HLH 7.3e-10 No_clan