Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0096 ATGGCCTCCCCTGCTTCTCTCTACGAAGTTCTTGGGATTTCAAGGACTGCAAGCTTCGGCGAGATCAAGATCGCTTACAGGAAGCTCGCAAGAACGTGCCACCCTGATGTGGTGACGATGAACCAGAAGGGACATTCATGTGATGAGTTCGTGAATATTAATACGGCGTATTCAACACTTTCAGACCCAGAAAAGCGAGCGCAATATGACAGAGAAATTTGCAGGCATGGCAGATCTTATTCATCTCTGACTTCATCACATGGAAACTCTGTCTCAGGTTATCAACGCAGATATCCTCAAGCTGCACACAAGTGGGAGACTGATCAGTGTTGGTAG 336 0.4702 MASPASLYEVLGISRTASFGEIKIAYRKLARTCHPDVVTMNQKGHSCDEFVNINTAYSTLSDPEKRAQYDREICRHGRSYSSLTSSHGNSVSGYQRRYPQAAHKWETDQCW 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0096 111 CDD DnaJ 8 62 IPR001623 -
Bisa04g0096 111 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Bisa04g0096 111 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Bisa04g0096 111 SMART dnaj_3 5 65 IPR001623 -
Bisa04g0096 111 Pfam DnaJ domain 7 70 IPR001623 -
Bisa04g0096 111 PRINTS DnaJ domain signature 8 26 IPR001623 -
Bisa04g0096 111 PRINTS DnaJ domain signature 26 41 IPR001623 -
Bisa04g0096 111 PRINTS DnaJ domain signature 45 65 IPR001623 -
Bisa04g0096 111 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 108 - -
Bisa04g0096 111 Gene3D DnaJ domain 1 92 IPR036869 -
Bisa04g0096 111 SUPERFAMILY Chaperone J-domain 4 76 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0096 Bisa-ChrBisa04 1457475 1457810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0096 8 70 C2H2 Transcription Factor Family AT1G74250 47.761 1.53e-09 52.0