Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0086 ATGGAAAAAGAGAGTGGTAAAGCAATGCGTAAGGAGATCTCATTTCTTCTTCAACCGCGATGCCTCTTCCTCTTTCTTGCTCTTTCAATTTTCCTGATTTTCGTCTTCTCTGATTCTAAGCGGGCTGAGGAGAAAGCAGAAGTAGAGCCTGAAATTACACATAGAGTATACTTGGATGTTGATATTGATGAACAACGTTTAGGCAGGATCATAATTGGATTATATGGCCAAGTTGTACCAAAAACTGTGGAGAATTTTCGAGCTTTGTGCACAGGGGAGAAAGGCAAGAATTCCCATGGCATAAGACTTCGTTATAAAGGAACACCATTTCATCGCATAATATCTGGTTTCGTGATTCAGGGTGGAGACATTGTTCATCGTGATGGCAGTGGATATGAATCTATCTATGGTGGCACCTTTCCTGATGAGAATTTCAAAACAAAACATTCACACGCTGGTGTTGTCTCTATGGTGAATTCAGGACCTGATTCCAATGGCTCTCAGTTTTTTATTACCACAGTGAAGGCTAGCTGGTTGGATGGAGAACATGTGGTGTTTGGGAAGGTGGTAGAAGGAATGGACACTGTGTTTGCAATAGAAGGGGGTGCTGGAACCTACAGTGGGAAACCCAGAAAGAAGGTAATAATCTCAGACTCTGGAGAGATACCCAGGAGTCAGTGGGACGAGCAAAGCTGA 696 0.4296 MEKESGKAMRKEISFLLQPRCLFLFLALSIFLIFVFSDSKRAEEKAEVEPEITHRVYLDVDIDEQRLGRIIIGLYGQVVPKTVENFRALCTGEKGKNSHGIRLRYKGTPFHRIISGFVIQGGDIVHRDGSGYESIYGGTFPDENFKTKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVVEGMDTVFAIEGGAGTYSGKPRKKVIISDSGEIPRSQWDEQS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0086 231 Gene3D - 42 228 IPR029000 -
Bisa04g0086 231 SUPERFAMILY Cyclophilin-like 51 222 IPR029000 -
Bisa04g0086 231 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 60 218 IPR002130 GO:0000413|GO:0003755
Bisa04g0086 231 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 57 221 IPR002130 GO:0000413|GO:0003755
Bisa04g0086 231 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 105 122 IPR020892 GO:0003755|GO:0006457
Bisa04g0086 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 55 222 - -
Bisa04g0086 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 122 IPR002130 GO:0000413|GO:0003755
Bisa04g0086 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 168 IPR002130 GO:0000413|GO:0003755
Bisa04g0086 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 181 196 IPR002130 GO:0000413|GO:0003755
Bisa04g0086 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 74 89 IPR002130 GO:0000413|GO:0003755
Bisa04g0086 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 168 180 IPR002130 GO:0000413|GO:0003755
Bisa04g0086 231 FunFam Peptidyl-prolyl cis-trans isomerase 42 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0086 Bisa-ChrBisa04 1316947 1321787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0086 68 216 U-box Gene Family AT5G67530 44.000 3.29e-26 104