Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa04g0081 | ATGGGAAGGTCTCCGTGCTGCGAGAAGGCTCACACCAACAAGGGAGCCTGGACCAAGGAAGAAGACGACCGCCTCATTGCCTACATCCGAGCTCACGGCGAGGGCTGCTGGCGCTCCCTCCCCAAGGCCGCCGGCCTCCTCCGATGCGGTAAGAGCTGCCGCCTCCGCTGGATCAACTACCTCCGCCCCGACCTCAAACGCGGCAATTTCACCGAGGAAGAAGACGAGCTCATCATCAAACTCCACAGTCTCCTCGGCAACAAGTGGTCTCTGATAGCTGGGAGATTACCGGGGAGAACAGACAATGAGATAAAGAATTACTGGAACACTCATATAAGAAGGAAGCTTCTGAGCAGAGGAATTGACCCTGCGACTCACAGACCTCTCAACGAGGCGTCTCAGAATCAGAATCAGAATCATCAAGAAGCCCCTGCAATATCTTTTGCTTCATCTGCTTCTGCAGCTATTAAACGAGAAGAAAGGGAGAATATTCTAACGAAAGATGCAAATTCAAAACAATCTGTTGTCTTAGACTTGAACCTTGAGCTAACCATAAGTCCCCCTCACCACCAGAACCAGCCCCATCATGATCAGCCATTGTTGAAGAGCAATGGTGTTGCAGGGAGCACCAGTGGAAGCAGCAGTAGCAGTGGAAGTGGTTATGATTTCTTGGGGTTGGAAAGCAGTGTTTTGGATTACAGAAACTGTGTAAAAGTAGAGGGAAGAGGAATTAGAGAATGA | 741 | 0.5034 | MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNEASQNQNQNHQEAPAISFASSASAAIKREERENILTKDANSKQSVVLDLNLELTISPPHHQNQPHHDQPLLKSNGVAGSTSGSSSSSGSGYDFLGLESSVLDYRNCVKVEGRGIRE | 246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa04g0081 | 246 | Gene3D | - | 14 | 66 | - | - | |
| Bisa04g0081 | 246 | CDD | SANT | 69 | 112 | IPR001005 | - | |
| Bisa04g0081 | 246 | SMART | sant | 66 | 114 | IPR001005 | - | |
| Bisa04g0081 | 246 | SMART | sant | 13 | 63 | IPR001005 | - | |
| Bisa04g0081 | 246 | CDD | SANT | 16 | 61 | IPR001005 | - | |
| Bisa04g0081 | 246 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 1 | 189 | - | - | |
| Bisa04g0081 | 246 | SUPERFAMILY | Homeodomain-like | 13 | 108 | IPR009057 | - | |
| Bisa04g0081 | 246 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
| Bisa04g0081 | 246 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
| Bisa04g0081 | 246 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
| Bisa04g0081 | 246 | FunFam | MYB-related transcription factor | 13 | 66 | - | - | |
| Bisa04g0081 | 246 | Gene3D | - | 69 | 146 | - | - | |
| Bisa04g0081 | 246 | MobiDBLite | consensus disorder prediction | 128 | 142 | - | - | |
| Bisa04g0081 | 246 | FunFam | Myb transcription factor | 68 | 137 | - | - | |
| Bisa04g0081 | 246 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
| Bisa04g0081 | 246 | Pfam | Myb-like DNA-binding domain | 67 | 111 | IPR001005 | - | |
| Bisa04g0081 | 246 | MobiDBLite | consensus disorder prediction | 123 | 142 | - | - | |
| Bisa04g0081 | 246 | MobiDBLite | consensus disorder prediction | 185 | 220 | - | - | |
| Bisa04g0081 | 246 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa04g0081 | Bisa-ChrBisa04 | 1234405 | 1235878 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa04g0081 | 1 | 235 | MYB Transcription Factor Family | AT4G38620 | 58.214 | 2.62e-100 | 291 |
Transcription factors information