Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0080 ATGGCGTTGCCGGTGGTGGACACGGAGTACCTGAAAGAGATCGAGAAGGCTCGTCGTGATCTCCGCGCGCTCATCTCCAGCAGGAACTGCGCGCCTATCATGCTTCGCTTGGCTTGGCACGATGCAGGAACCTACGATGCCGGAACGAAGACGGGAGGACCTAATGGCTCCATTAGGAATGAAGAAGAGTATTCACACGGCTCCAACAATGGCCTGAAGAAGGCTATTGATTTTTGTGAGGAAGTGAAGGCAAAACGTTCAAAGATAACATATGCAGACCTTTATCAGCTTGCTGGTGTTGTTGCAGTTGAGGTTACTGGAGGTCCCACAATTGACTTTGTTCCTGGGAGAAGGGATTCAAATATATGTACTAGAGAAGGACGGCTTCCTGATGCTAAGCAAGGTGTCACCCATCTTCGTGATATCTTTTATCGTATGGGCCTGTCTGACAAGGATATTGTTGCACTGTCTGGGGGGCATACTCTGGGAAGGGCACATCCAGAGAGATCAGGGTTTGCTGGTCCTTGGACGGAGGAACCTTTGAAGTTTGATAACTCATACTTTGTGGAAATGTTAAAAGGAGATTCTGAGGGGCTGCTTAAACTTCCAACGGACAAGGCTTTGTTGGAGGATCCTGAATTTCGTCGTTATGTTGAGCTTTATGCAAAGGATGAGGATGCATTTTTTAGAGACTATGCTGAATCGCATAAGAAACTTTCAGAGCTAGGGTTTGTGCCAAGTTCAAAGCCAAAAATCAAGGATGGTGTTATACTGGCACAAAGCGCTGTTGGAATTGTAGTTACTGCTGCTGTGGTGATCCTGAGTTACTTGTATGAAGTTCGCAAAAAAGCAAAGTAG 858 0.4662 MALPVVDTEYLKEIEKARRDLRALISSRNCAPIMLRLAWHDAGTYDAGTKTGGPNGSIRNEEEYSHGSNNGLKKAIDFCEEVKAKRSKITYADLYQLAGVVAVEVTGGPTIDFVPGRRDSNICTREGRLPDAKQGVTHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFAGPWTEEPLKFDNSYFVEMLKGDSEGLLKLPTDKALLEDPEFRRYVELYAKDEDAFFRDYAESHKKLSELGFVPSSKPKIKDGVILAQSAVGIVVTAAVVILSYLYEVRKKAK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0080 285 CDD ascorbate_peroxidase 4 244 - -
Bisa04g0080 285 FunFam L-ascorbate peroxidase, cytosolic 130 236 - -
Bisa04g0080 285 FunFam Cytosolic ascorbate peroxidase 17 134 - -
Bisa04g0080 285 Pfam Peroxidase 18 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 ProSiteProfiles Plant heme peroxidase family profile. 31 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
Bisa04g0080 285 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Bisa04g0080 285 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 7 247 IPR044831 GO:0004601|GO:0034599
Bisa04g0080 285 Gene3D Peroxidase, domain 2 130 236 - -
Bisa04g0080 285 Gene3D - 17 243 - -
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 168 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa04g0080 285 SUPERFAMILY Heme-dependent peroxidases 13 247 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0080 Bisa-ChrBisa04 1208785 1220666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0080 31 239 Peroxidase AT4G16270 31.818 6.68e-22 92.0