Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0066 ATGTCGAAGGAAGTGAGTGAAGAAGGCCAATCCCACAACCACCACCATGGCAAGGACTACGTGGACCCTTCTCCCGCTCCTCTCATCGACGTTGCCGAGCTCAAGCTCTGGTCCTTCTACAGAGCTCTCATCGCCGAGTTCATCGCCACCCTCCTCTTCCTCTACATCACCCTCGCCACCGTCATTGGCCACAAAAACCAAACCGAACCCTGCGACGGCGTCGGCATTCTCGGCATCGCCTGGGCCTTCGGCGGCATGATCTTCGTCCTCGTCTACTGCACCGCCGGCATCTCCGGTGGGCACATCAACCCTGCGGTGACGTTTGGGCTGTTCCTGGCTCGGAAGGTGTCGTTGATTCGAGCTGTAGCTTACATGGTGGCGCAGTGCCTTGGAGCCATTTGTGGTGCAGGGTTAGTGAAGGCCTTCATGAAGAATCCGTACAACTCACTCGGTGGTGGCGCCAACTCTGTCTCTCCTGGCTACAACACAGGCACTGCTCTTGGTGCTGAGATTATCGGTACCTTCGTGCTTGTCTACACCGTATTCTCCGCCACTGACCCCAAAAGAAAAGCCCGTGACTCCCATGTCCCTGTTCTGGCTCCATTGCCAATTGGATTTGCAGTGTTTATGGTTCACTTGGCTACCATTCCCATCACTGGTACTGGTATAAACCCAGCTAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGCTGGAGTTTGGGACGACCATTGGATATTCTGGGTTGGTCCGTTTGTGGGAGCATTGGCGGCGGCGGCGTACCACCAGTATATACTGAGGGCGGCGGCTATCAAGGCGTTGGGATCGTTCCGGAGCAACCCCACCAACTAA 852 0.5563 MSKEVSEEGQSHNHHHGKDYVDPSPAPLIDVAELKLWSFYRALIAEFIATLLFLYITLATVIGHKNQTEPCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGAGLVKAFMKNPYNSLGGGANSVSPGYNTGTALGAEIIGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNAGVWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0066 283 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Bisa04g0066 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 4 272 IPR034294 -
Bisa04g0066 283 NCBIfam MIP family channel protein 45 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g0066 283 CDD MIP 41 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g0066 283 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g0066 283 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g0066 283 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g0066 283 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g0066 283 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g0066 283 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g0066 283 MobiDBLite consensus disorder prediction 1 20 - -
Bisa04g0066 283 FunFam Probable aquaporin PIP1-2 26 281 - -
Bisa04g0066 283 Pfam Major intrinsic protein 34 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g0066 283 Gene3D Glycerol uptake facilitator protein. 26 283 IPR023271 -
Bisa04g0066 283 SUPERFAMILY Aquaporin-like 33 267 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0066 Bisa-ChrBisa04 1030441 1031627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0066 1 283 Major Intrinsic Protein MIP AT2G16850 89.399 0.0 511