Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0054 ATGTTGCCGCTTCATACATGGAGTAGATCTCTCTCAATCCCCCCACTTCGCTGTATCTCATCTTCGGATCAGAAAAAGAGCTCAAATATGGGTGCCGAGCAAAACAATCACGATATGGAGGAAGGAACCTTGGAGATAGGAATGGAATATAGAACTGTATCTGGAGTTGCTGGACCGTTGGTCATTCTTGATAAAGTTAAGGGACCTAAATATCAAGAGATTGTTAATATTCGGTTAGGAGATGGAACTACTCGCCGTGGGCAAGTTCTAGAAGTTGATGGTGAAAAGGCTGTTATTCAGGTTTTTGAAGGTACATCTGGGATTGACAATAAATTTACGACTGTGCAATTTACTGGAGAGGTGTTGAAAACTCCTGTCTCACTGGACATGCTTGGGCGTATATTTAATGGTTCTGGAAAACCAATTGATAATGGTCCACCCATATTGCCTGAGGCATACTTGGATATATCAGGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAGACAGGAATTTCCACAATTGATGTCATGAATTCTATTGCCAGAGGTCAAAAGATTCCCCTTTTTTCAGCTGCTGGTCTTCCCCATAATGAGATTGCTGCTCAGATATGTCGTCAAGCTGGCTTAGTCAAGCGATTGGAGAAAACTGATAATCTTCTTGAGGATGGGGAAGAGGATGATTTTGCCATTGTATTTGCAGCTATGGGAGTTAACATGGAAACTGCCCAGTTTTTTAAGCGAGACTTTGAGGAGAATGGCTCAATGGAGAGAGTGACCCTTTTTCTTAATCTGGCAAATGATCCTACCATTGAACGTATCATCACTCCTCGCATTGCTCTTACTACTGCTGAATATCTGGCATATGAATGTGGGAAGCATGTTCTTGTGATACTTACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCCGCTCGAGAGGAAGTGCCTGGAAGGCGTGGGTATCCTGGTTACATGTATACAGATCTTGCAACAATCTATGAACGAGCTGGAAGAATTGAGGGGCGAAAAGGCTCCATTACACAAATTCCAATTCTAACCATGCCAAATGATGATATTACGCATCCAACCCCTGACCTTACAGGATATATTACCGAGGGTCAGATATACATTGATAGGCAACTGTATAACAGACAGATATATCCACCAATCAATGTCCTTCCATCACTGTCTCGGTTGATGAAGAGTGCCATTGGTGAAGGAATGACTCGACGGGATCATTCTGATGTGTCCAACCAGCTCTATGCTAATTATGCCATTGGAAAGGATGTCCAAGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCATCTGAGGATCTGCTGTATTTGGAATTTTTGGATAAGTTTGAGAGGAAGTTTGTTGCCCAAGGAGCTTATGACACCCGCAATATCTTCCAGTCACTAGATCTTGCATGGACTTTGCTTCGGATTTTCCCCCGTGAGCTTCTTCACCGTATACCAGCAAAGACACTTGATCAATTTTATAGTCGGGATGCTGGAAATTGA 1554 0.4279 MLPLHTWSRSLSIPPLRCISSSDQKKSSNMGAEQNNHDMEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVIQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDDFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDAGN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0054 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 412 IPR027417 -
Bisa04g0054 517 CDD ATP-synt_V_A-type_beta_N 49 120 - -
Bisa04g0054 517 CDD V_A-ATPase_B 121 414 - -
Bisa04g0054 517 MobiDBLite consensus disorder prediction 18 37 - -
Bisa04g0054 517 Pfam ATP synthase alpha/beta family, beta-barrel domain 53 119 IPR004100 GO:0046034|GO:1902600
Bisa04g0054 517 FunFam V-type proton ATPase subunit B, brain 58 517 - -
Bisa04g0054 517 Hamap V-type ATP synthase beta chain [atpB]. 47 515 IPR022879 -
Bisa04g0054 517 Gene3D - 58 516 - -
Bisa04g0054 517 MobiDBLite consensus disorder prediction 18 36 - -
Bisa04g0054 517 PIRSF V-ATPsynth_beta/V-ATPase_B 40 517 IPR022879 -
Bisa04g0054 517 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 33 514 IPR022879 -
Bisa04g0054 517 ProSitePatterns ATP synthase alpha and beta subunits signature. 397 406 IPR020003 GO:0005524
Bisa04g0054 517 CDD ATP-synt_V_A-type_beta_C 416 510 - -
Bisa04g0054 517 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 176 406 IPR000194 GO:0005524
Bisa04g0054 517 NCBIfam V-type ATPase subunit B 49 515 IPR005723 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0054 Bisa-ChrBisa04 852815 859930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0054 24 517 Primary Pumps ATPases(2) AT4G38510 95.749 0.0 969