Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0044 ATGGATTCGCTTAGAAAGTCCTTTAAATCCTATTACTCTTACAAGCATCCCAGAAAGATCCCCACCGGCATAAACCCAGACTCCGGCCACGAACAGCTCCCCATTCTCTTGGATCAAGAAACTTCTTCTGAAGATCATCCTCCTCTGTCATCGATGAGCTCCTCTACTTCCACACACCGGCCCGAAGTTATCGTTAAGATCGACGAAGGCAACTCCAAAGGCCCCGTGGGGCAGCAAGGTAGTAAGATTTGGAGAGAATCTAGCTACGATTTCTGGAGTGAAGGACCTGCCCGTAAGAGTGCCAGTGATGGGGGTGCTACTGCTAGTGGTAATGACGACGAGGATGGCTTTGATTTCCGGCATCGCGAGCAGGGTCCTGAGGATCCACCTTCCATGCTCATTGGTAAGTTCTTGCACAAACAGAAAGCGTCCGGTGACGTGTCGCTGGATATGGATTTAGAAATGGAGGAGCTCCAGCATGACCACAAATTGTCGCCGGTGGAAGAGTCTCCGCAGCTCAATCGGATTTCCAAGGACCTCAAAGTCTCGTTCGAGGAACCAGCTTCCAATGTGGTTGAGTTGGCACCCGATTCCGTAAGACGAAGGCATAAGGACTCGCCGAGTCACATAGAATTTCAAAAATCGCCGCAGCACGATCATTGGGGGTCCCCTGGTGTAGCTCAAAGTGGTAACGCTGGTGGTGGAGATGGCGAGGTAGTGAGATGTACATCAAACGCTTCCTTTGAAAGAAACCTTTCGATGAGGAAATCTGCTTTGCTAAAGGCCAAAACTAAGTCAAGGTTGATGGATCCACCGGAGGAACGGGACCGGAGGTCTGGTCGGGTGCCAAAATCAGGGAATATGATATCGCAGTTGTTGGGGAAGAAAGGGGATGATGAGGAAGACGATCCATTTTTGGAAGAGGACGTGCCAGATGAGCTTAAAAAGACACATTTTAGTATATGGATTCTACTTGAGTGGTTGAGTTTGATTTTGATTGTTGCTGCTCTAGTATGCACGCTGTGTATTCCAATTTTGAGGAATAAGAATCTCTGGAAGCTTAAGTTATGGAAGTGGGAGGTTATGGTCCTGGTTCTAATTTGTGGTCGATTAGTTTCTGATTGGGTAATCCGAATACTGGTGTTCTTCATCGAAAGGAGTTTCCTTCTGCGCAAGAGAGTCCTCTATTTTGTATATGGTGTGAGGAAAGCAGTTCAAAATTGTCTATGGTTGGGATTTGTTTTGATTGCTTGGCACCTGTTATTTGATAAGAAGGTTGAGAGGGAGACTAGAAGCGACTTCCTTAAATATGTCACCAAGATCTTGGTCTGTTTCTTGGTGGGTACTTTGGTGTGGTTGGTGAAAACGCTCGTGGTTAAGGTTCTGGCCTCCTCGTTCCATGTAAGCACATATTTTGATAGGATTCAGGAGTCACTGTTTAATCAATTTGTGATCGAAACTCTGTCTGGGCCACCCCTGGTTGAAATTCAGAAGTCAGAGGAAGAGGAGCAAAAGCTTGCTGATGAGGTTCAGAAACTGCAAAATGCTGGGGTTACCATACCCCCTGATCTCCGGGCAACTGCCTTCGCTACAACTAAGAGTCCAGGGGTGGCAAAGAGTCCAAGGGTGGGAAAGAGCGGAGTGCTCCAGAAAAGCCCTCGTCTGATAAGTGGGAAGTTTTCTCGGCCACTTTCCCACAAGTCAGATGATGCAATTTCTATTGATCACCTGCATAAGCTGAATCCCAAAAATATATCTGCTTGGAACATGAAAAGGTTAATGAATATGGTCCGACAGGGCACTCTTTCTACACTTGATGAACAGATACTTGATTCAGCTCAAGACGATGAAAATGCCACACAGATTAGAAGTGAAAATGAGGCCAAAGCTGCGGCAAAGAAAATATTTCAGAATGTTGCGAGGCGGGGTTGCAGGTATATTCGCCTGGAGGATTTGATGCGTTTTTTGAGAGAAGATGAAGCTGAAAAAGCCATGAATCTCTTTGAAGGAGCGTCTGAGACTGGGAAAATCAGTAAACCTGCCTTGAAGAACTGGGTGGTTAATGCCTTCAGAGAGAGGAGGGCACTTGCTTTGACATTGAATGATACCAAAACAGCAGTGAACAAACTTCATCGAATGCTCAACGTTTTAGTTGGCATCATTATACTGGTTATCTGGCTCTTAATATTGGAAATTGCAACTACCAAATTACTTCTTTTTGTGAGCTCACAGGTTGTCGTGGTTGCGTTTATATTTGGAAATACCTGCAAGACGGTATTTGAATCCATTATTTTCTTGTTTGTCATGCACCCATTTGATGTGGGAGATAGGTGCGAGATTGATGGAGTTCAGTTGGTTGTAGAAGAAATGAACATATTGTCAACCGTATTTTTAAGATTTGACAATCAAAAAGTTATTATCCCTAACAGTGTCCTTGCCACTAAGGCCATCAGTAATTACTACCGCAGTCCTGACATGGGAGATGCTATTGATTTCTGTATACATGTATCTACCCCACCTGAAAAGATTACACTTATGAAACACAGAATACAGAGTTACATCGATAACAAGAAGGAGCATTGGTATCCTACAACTTTCATAGTGTTAAGGGATCTGGAACAGTTAAACATGGTAAAAATATCAATTTGGCCAACCCACACAATGAACCACCAAGACATGGGAGAAAGGTTTGTGAGGAGATCCCTTCTGCTTGAAGAGCTGATGAAGATATTCCGAGAGGTTGACATTCAGTACCGTCTTCTTCCTCTTGATATTAACATCAGAGGCATGCCTACCACCTCTGAGCGGCTTCCTCCTAGTTGGACCACGATCACAAGCACATAA 2844 0.4476 MDSLRKSFKSYYSYKHPRKIPTGINPDSGHEQLPILLDQETSSEDHPPLSSMSSSTSTHRPEVIVKIDEGNSKGPVGQQGSKIWRESSYDFWSEGPARKSASDGGATASGNDDEDGFDFRHREQGPEDPPSMLIGKFLHKQKASGDVSLDMDLEMEELQHDHKLSPVEESPQLNRISKDLKVSFEEPASNVVELAPDSVRRRHKDSPSHIEFQKSPQHDHWGSPGVAQSGNAGGGDGEVVRCTSNASFERNLSMRKSALLKAKTKSRLMDPPEERDRRSGRVPKSGNMISQLLGKKGDDEEDDPFLEEDVPDELKKTHFSIWILLEWLSLILIVAALVCTLCIPILRNKNLWKLKLWKWEVMVLVLICGRLVSDWVIRILVFFIERSFLLRKRVLYFVYGVRKAVQNCLWLGFVLIAWHLLFDKKVERETRSDFLKYVTKILVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQKSEEEEQKLADEVQKLQNAGVTIPPDLRATAFATTKSPGVAKSPRVGKSGVLQKSPRLISGKFSRPLSHKSDDAISIDHLHKLNPKNISAWNMKRLMNMVRQGTLSTLDEQILDSAQDDENATQIRSENEAKAAAKKIFQNVARRGCRYIRLEDLMRFLREDEAEKAMNLFEGASETGKISKPALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNVLVGIIILVIWLLILEIATTKLLLFVSSQVVVVAFIFGNTCKTVFESIIFLFVMHPFDVGDRCEIDGVQLVVEEMNILSTVFLRFDNQKVIIPNSVLATKAISNYYRSPDMGDAIDFCIHVSTPPEKITLMKHRIQSYIDNKKEHWYPTTFIVLRDLEQLNMVKISIWPTHTMNHQDMGERFVRRSLLLEELMKIFREVDIQYRLLPLDINIRGMPTTSERLPPSWTTITST 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0044 947 MobiDBLite consensus disorder prediction 266 282 - -
Bisa04g0044 947 MobiDBLite consensus disorder prediction 199 216 - -
Bisa04g0044 947 MobiDBLite consensus disorder prediction 199 238 - -
Bisa04g0044 947 MobiDBLite consensus disorder prediction 113 127 - -
Bisa04g0044 947 FunFam Predicted mechanosensitive ion channel 771 820 - -
Bisa04g0044 947 Pfam Mechanosensitive ion channel 713 917 IPR006685 GO:0016020|GO:0055085
Bisa04g0044 947 MobiDBLite consensus disorder prediction 35 61 - -
Bisa04g0044 947 Gene3D - 771 820 IPR023408 -
Bisa04g0044 947 PIRSF Memb_At2g17000 38 947 IPR016688 -
Bisa04g0044 947 MobiDBLite consensus disorder prediction 263 306 - -
Bisa04g0044 947 Coils Coil 496 516 - -
Bisa04g0044 947 SUPERFAMILY Sm-like ribonucleoproteins 761 820 IPR010920 -
Bisa04g0044 947 MobiDBLite consensus disorder prediction 16 133 - -
Bisa04g0044 947 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 44 941 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0044 Bisa-ChrBisa04 762806 767260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0044 57 946 Mechanosensitive Ion Channel Family AT1G78610 58.124 0.0 964