Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0043 ATGGCGATGGAGGATAACGAGAGCTGTGGGAGTAAAGTGCAGGATACGTCGTGGTCGTCACCGGCGCAATCCCGGCAACAACGGCAGAAGCTCGAAGTGTACAATGAGGTTCTTCGTCGCCTAATGGATTCCGACAACGAAGAGGCTATGCAGCCTGGCTTCGACCAACAGCTCTGGGCTCACTTCAACCGTCTTCCAACACGGTATGCACTGGATGTGAATGTGGAAAGAGCCGCGGATGTTCTAATGCACAAAAGACTACTGCATTTGGCACACGATCCTGCTAACAGGCCTGCAATTGAAGTTCGGCTGGTCCAGGTTCAACCCATATCTGATGGAAATTTAGCTGACTCTGTCCATTCAGAAGCTCCTTGTAAAGAAGCTGGTCAAATCTCTTCAAAGACATCAGGGAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAACCTTGAAGCCCTGTTACTTGAAGCAACTAAATGTGAAGATTTAGAGGAGGAACACTCTGTGCATGCTGGTGAACAATATTCGCGGCCTATGCATGAAATCACCTTTTCAACAGAAGACAAGCCTAAGCTTCTCAGCCAGTTAACTTGTTTGCTTGCTGAGATTGGACTGAACATTCAAGAGGCACATGCTTTTTCCACAACTGATGGTTACTCATTAGATGTGTTTGTCGTTGATGGATGGCCCTATGAGGAAACACAGCAGCTTAAAGCAGCTCTGGAAGAAGAAGTTATGTTGATTGAGAGGCAGGTATGGCCCATTCAACAGTCAGTATCTTCTGTTTACGAGCCTGATCAAACAGGGGTGAAGTGTGATCCTGATCATCTGACAATACCTAATGATGGGACGGATGTTTGGGAAATAGATCCTAAACATTTGAAATTTGGAAGTAAAATTGCATCTGGATCATATGGTGATCTATTTAAAGGCACTTATTGTAGTCAGGAAGTGGCAATTAAAGTTCTCAAGGCTGAGAATGTAAATTCAGATTTGCAGAGCGAGTTTGCACAAGAAGTCTTTATCATGAGGAAGGTTAGGCACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAGCCCCCATATTTGTGCATAGTAACAGAATTTATGTCCGGTGGAAGCGTGTATGACTACTTACATAAGCAAAAGGGCATTTTTAAATTTCCATCCCTGCTTAAAGTTGCGATTGATGTCTCTAAGGGAATGAACTACTTGCACCAGAATAACATTATCCATAGAGACTTGAAGGCTGCAAATCTTTTGATGGATGAAAATTGTGTTGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGCTCAATCTGGAGTCATGACAGCAGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATAGAACACAAGCCATATGATCACAAGGCTGATATATTTAGTTTTGGAGTTGTTTTGTGGGAATTGCTGACTGGAAAGCTTCCATATGAGTATTTGACCCCACTACAGGCAGCTATAGGAGTGGTTCAGAAGGGTCTTCGGCCTACCATCCCCAAGAATACTCATCCAAAGTTTGTTGAGCTTCTTGAGAGGTGTTGGCAACAAGATCCAACATTGAGACCTGATTTCTCTGAAATTATTGAGATCCTACAACAGTTGGCTAAAGAGGTGGGAGATGGAGAGGATTCGCGCAAAGAAAAATCTGGCGGGTTTTTGTCTATCCTCAGACGAGGCCATAACTAG 1731 0.4385 MAMEDNESCGSKVQDTSWSSPAQSRQQRQKLEVYNEVLRRLMDSDNEEAMQPGFDQQLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRPAIEVRLVQVQPISDGNLADSVHSEAPCKEAGQISSKTSGRQSIHPPPAFGSSPNLEALLLEATKCEDLEEEHSVHAGEQYSRPMHEITFSTEDKPKLLSQLTCLLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPYEETQQLKAALEEEVMLIERQVWPIQQSVSSVYEPDQTGVKCDPDHLTIPNDGTDVWEIDPKHLKFGSKIASGSYGDLFKGTYCSQEVAIKVLKAENVNSDLQSEFAQEVFIMRKVRHKNVVQFIGACTKPPYLCIVTEFMSGGSVYDYLHKQKGIFKFPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENCVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERCWQQDPTLRPDFSEIIEILQQLAKEVGDGEDSRKEKSGGFLSILRRGHN 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0043 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Bisa04g0043 576 Gene3D Transferase(Phosphotransferase) domain 1 376 565 - -
Bisa04g0043 576 Coils Coil 234 254 - -
Bisa04g0043 576 MobiDBLite consensus disorder prediction 115 150 - -
Bisa04g0043 576 CDD ACT_TyrKc 182 248 - -
Bisa04g0043 576 Gene3D Phosphorylase Kinase; domain 1 287 375 - -
Bisa04g0043 576 PRINTS Tyrosine kinase catalytic domain signature 454 464 IPR001245 GO:0004672|GO:0006468
Bisa04g0043 576 PRINTS Tyrosine kinase catalytic domain signature 408 426 IPR001245 GO:0004672|GO:0006468
Bisa04g0043 576 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Bisa04g0043 576 PRINTS Tyrosine kinase catalytic domain signature 517 539 IPR001245 GO:0004672|GO:0006468
Bisa04g0043 576 PRINTS Tyrosine kinase catalytic domain signature 371 384 IPR001245 GO:0004672|GO:0006468
Bisa04g0043 576 Pfam Protein tyrosine and serine/threonine kinase 297 546 IPR001245 GO:0004672|GO:0006468
Bisa04g0043 576 ProSiteProfiles ACT domain profile. 184 263 IPR002912 -
Bisa04g0043 576 MobiDBLite consensus disorder prediction 128 146 - -
Bisa04g0043 576 FunFam Serine/threonine-protein kinase isoform 1 287 375 - -
Bisa04g0043 576 MobiDBLite consensus disorder prediction 1 29 - -
Bisa04g0043 576 CDD STKc_MAP3K-like 303 546 - -
Bisa04g0043 576 SUPERFAMILY Protein kinase-like (PK-like) 282 546 IPR011009 -
Bisa04g0043 576 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 99 553 - -
Bisa04g0043 576 FunFam serine/threonine-protein kinase HT1 376 566 - -
Bisa04g0043 576 SUPERFAMILY ACT-like 182 246 IPR045865 -
Bisa04g0043 576 MobiDBLite consensus disorder prediction 9 29 - -
Bisa04g0043 576 ProSiteProfiles Protein kinase domain profile. 297 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0043 576 SMART serkin_6 297 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0043 Bisa-ChrBisa04 735454 743138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0043 4 575 MAP Kinase Kinase Kinase AT4G35780 65.331 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa04g0043 PK_Tyr_Ser-Thr 4.8e-73 CL0016