Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0028 ATGGGTTGCTGCCAATCATCATTCTTCGGCCTCGCTGAAACTCACCCTGAAAAGCAGCAAAATCAACAACCCCACCACCACACCCACACCCACCCTCACAACCACATCTACTCCCAACCACACCCACCTTCTCTAACCGCCGACCCATCCGCCGCCGGTGGAGTCCCTTCTTTCTCCGAGTACTCTTTCTCCGACCTGAAAGCGGCCACCAATAATTTCATCTCAGAATTTATTGTGTCAGAGAGTGGAGAGAAGGCACCCAACCTTGTCTATAAGGGCCGCCTCCCCAACCGTCGTTGGATTGCCGTCAAGAAGTTCACCAAGGCTGCATGGCCCGATCCCAAGCAATTTGTGGAAGAGGCGTCAGGTGTTGGAAAACTGCGACATCGCAGGCTTGCTAATTTGATTGGCTACTGCTGTGATGGAGATGAGAGGCTGCTTGTTGCAGAGTACATGCCTAATGATACTCTCGCTAAGCATCTTTTCCACTGGGAAAATCAGACCATTGAGTGGGCCATGCGCTTAAGAGTGGCTCTTTCAATTGCAGAAACTTTAAATTACTGTAGTTCTGAGGGCCGCCCCTTATACCATGATTTGAATGCTTATAGGGTTCTTTTCGATGAGGAAGGTGATCCACGTCTGTCATGTTTTGGTTTAATGAAGAACAGTAGGGATGGAAAAAGTTATAGCACGAATCTTGCTTACACACCTCCTGAATACTTGAGAAATGGAAGGGTCACTCCTGAAAGTGTCATTTACAGCTTTGGCACGGTTCTCCTAGACCTGCTCAGTGGGAAACACATTCCTCCAAGTCATGCTCTTGACATGATACAGGGGAAAAACAACATACTCTTAATGGATTCACATTTGGAGGGAAAGTTTTCTACAGAAGAGGCAACAGTAGTTGTTAATCTTGCCTCTAAATGTTTGCAATATGAGCCCAGAGAGCGGCCTGATACAAAAGATTTGGTCACAACGCTTGCTCCATTGCAAACAAAACCTGATGTTCCTTCTTACGTTATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAACCCCGCAACGCCCTCTTTCAGCAATGGGGGAGGCTTGTTCAAGGATGGACCTCACTGCAATACATCAGATCTTGGTTGCAACACACTACAGAGATGACGAAGGAACTAATGAGTTGTCCTTCCAAGAGTGGACCCAACAGATGAGAGATATGTTGGAAGCAAGAAAGCGAGGAGACTATGCTTTCCGTGATAAAGATTTTAGGACAGCCATTGAAAATTATTCACAGTTCATCGATGTGGGAACGATGGTGTCCCCAACTGTATTTGCAAGGCGCAGTCTGTGCTATCTGTTATGTGATCAACCAGATCCTGCCCTGCAGGCACAAAGTGCCCTTAGAGATGCAATGCAGGCACAATGTGTTTATCCAGACTGGCCTACAGCTTTTTACATGCAATCGGTTGCTCTTGCGAAGCTGGACATGCACAAGGATGCCGCTGATATGTTAAATGAGGCTACTGCGTTGGAAGAAAAGAGGCAAAGAGGAGGCAGAGGATCATAG 1557 0.4708 MGCCQSSFFGLAETHPEKQQNQQPHHHTHTHPHNHIYSQPHPPSLTADPSAAGGVPSFSEYSFSDLKAATNNFISEFIVSESGEKAPNLVYKGRLPNRRWIAVKKFTKAAWPDPKQFVEEASGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALSIAETLNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNILLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLQTKPDVPSYVMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFRTAIENYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALQAQSALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEATALEEKRQRGGRGS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0028 518 MobiDBLite consensus disorder prediction 15 52 - -
Bisa04g0028 518 Gene3D Transferase(Phosphotransferase) domain 1 153 343 - -
Bisa04g0028 518 Gene3D Phosphorylase Kinase; domain 1 51 151 - -
Bisa04g0028 518 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 30 513 IPR045845 GO:0004672|GO:0009742
Bisa04g0028 518 FunFam probable serine/threonine-protein kinase At4g35230 48 151 - -
Bisa04g0028 518 FunFam probable serine/threonine-protein kinase At5g41260 153 344 - -
Bisa04g0028 518 ProSiteProfiles Protein kinase domain profile. 76 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0028 518 Gene3D Tetratricopeptide repeat domain 401 515 IPR011990 GO:0005515
Bisa04g0028 518 FunFam probable serine/threonine-protein kinase At4g35230 401 516 - -
Bisa04g0028 518 SUPERFAMILY TPR-like 404 511 IPR011990 GO:0005515
Bisa04g0028 518 SUPERFAMILY Protein kinase-like (PK-like) 58 337 IPR011009 -
Bisa04g0028 518 Pfam Protein tyrosine and serine/threonine kinase 91 327 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0028 Bisa-ChrBisa04 618178 636899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0028 27 339 Glycoside Hydrolase AT3G07070 34.412 1.25e-46 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bisa04g0028 PK_Tyr_Ser-Thr 7.4e-26 CL0016