Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0010 ATGCAGTTCGCAATTACCCGCGAAGCAGGGAAGACTGAAATGGGGATTTGCTGGGGTTCTCCGCATGACAACCCAAGCTCAAGCTCAAGGTCAAGCACAACTGATCACCTTAGTGCAGCCACAACGGGGACATCCCGGACCACCAGCACTGCTACTACTTCTACATCTTGTGGAAGTGGAGACAGCTCTACAAGCCGGTTCTCAGAGTCTAGTGGCGGTGAAACTTATCCAAACGGGCAGATTTTGCCTACTGCAAATTTGAGGACCTTCACTTTTGCGGAATTGAAGGCTGCAACTAAGAACTTCAGAGCTGATACAGTACTTGGGGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAAAAGGCAACGCCAAGGAATGGAAGTGGAACAGTCATTGCCGTTAAAAAATTGAACTCCGAGAGCATACAAGGATTTGAGGAGTGGCAGTCAGAAGTAATTTTTCTGGGACGGCTTTCTCATCCAAACCTCGTTAAACTGTTGGGATACTGTTGGGAGGAAACAGAGCTTCTTCTCGTCTATGAATTCATGCAAAGGGGCAGTTTGGAAAATCATCTATTTGGGAGGGGTTCTGCTGTTCAACCACTTCCTTGGGACATCAGGCTTAAGATTGCAATTGGAGCAGCTCGTGGCCTGGCATTCTTGCACACATCTGAGAAAGTAATCTATCGCGATTTCAAGGCCTCCAATATATTGCTGGATGGGTCGTATACTGCGAAGATATCAGACTTCGGGTTGGCAAAATTGGCGCCTTCAGCAAGTCGGTCGCATGTGACAACAAGGGTGATGGGGACATATGGGTATGCGGCTCCCGAGTATGTGGCGACGGGGCATCTGTATGTGAAGAGTGACGTGTATGGGTTTGGAGTTGTCTTGGTGGAAATGTTGACAGCCTTGCGGGCGCTTGATCCAAATCGTCCAAGCGGGCGACATAATCTAGTGGAGTGGGTGAAACCCTACCTCCAAGACAGAAGAAAATTGAAGAGCATCATGGATTCACGATTGGAGGGCAAATATCCATCCAAAGCTGCATTTCGTATAGCTCAGCTTGCTTTGAAATGCCTTGCATCCGAGCCCAAACAGCGCCCATCAATGAAGCAAGTTCTGGAGAGCCTGGAGCGCATTCAAGCCGCCAACCACAAACCTGTACCTTTGCACCCTACATCCCGTCATCATGCTCCTTCTCGCTGA 1218 0.4893 MQFAITREAGKTEMGICWGSPHDNPSSSSRSSTTDHLSAATTGTSRTTSTATTSTSCGSGDSSTSRFSESSGGETYPNGQILPTANLRTFTFAELKAATKNFRADTVLGEGGFGKVFKGWLEEKATPRNGSGTVIAVKKLNSESIQGFEEWQSEVIFLGRLSHPNLVKLLGYCWEETELLLVYEFMQRGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYTAKISDFGLAKLAPSASRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEMLTALRALDPNRPSGRHNLVEWVKPYLQDRRKLKSIMDSRLEGKYPSKAAFRIAQLALKCLASEPKQRPSMKQVLESLERIQAANHKPVPLHPTSRHHAPSR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0010 405 PANTHER OS01G0588500 PROTEIN-RELATED 43 385 - -
Bisa04g0010 405 ProSiteProfiles Protein kinase domain profile. 102 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0010 405 MobiDBLite consensus disorder prediction 21 80 - -
Bisa04g0010 405 SUPERFAMILY Protein kinase-like (PK-like) 81 396 IPR011009 -
Bisa04g0010 405 CDD STKc_IRAK 108 384 - -
Bisa04g0010 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Bisa04g0010 405 Pfam Protein tyrosine and serine/threonine kinase 105 381 IPR001245 GO:0004672|GO:0006468
Bisa04g0010 405 FunFam Serine/threonine-protein kinase PBS1 186 399 - -
Bisa04g0010 405 Gene3D Phosphorylase Kinase; domain 1 86 185 - -
Bisa04g0010 405 ProSitePatterns Protein kinases ATP-binding region signature. 108 139 IPR017441 GO:0005524
Bisa04g0010 405 MobiDBLite consensus disorder prediction 381 405 - -
Bisa04g0010 405 FunFam Serine/threonine-protein kinase BIK1 69 185 - -
Bisa04g0010 405 Gene3D Transferase(Phosphotransferase) domain 1 186 394 - -
Bisa04g0010 405 MobiDBLite consensus disorder prediction 14 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0010 Bisa-ChrBisa04 362412 365514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0010 85 405 Receptor kinase-like Gene Family AT4G02010 49.231 8.05e-102 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa04g0010 PK_Tyr_Ser-Thr 7.3e-48 CL0016