Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0008 ATGCAGTCAAGCTCTTCCCTGCTCTCGGTCAGTCTAGGTAAAAGGGCACGAGGCAAGCTAAAGTCAGTAGCAATCCGGTTCAAAACCTATTTGGTTAGGCTAAGCTGCTCCATTAGACGGCAGGCAAGGAAGCAAGCTGAAGCTAAGGCATTGAGTGACCCGAGGGAAGAAAGGGTATGTATAATAGAAAGGCATGAAGATTCCTTCCTGTATGGTCAGCAGTCTACGTGTTCACAAATTGAAGAACTTGAGTTATCAGATATGAAATCGACAGTTAGTCATTCTGAACAGCTCCAGTCATCAGAACTAAAGCAAATAGATAGTCACTCTAAGGAGCCCAAGTTATCAAAACGGAAACAAACTGCTAGTCATTCTAAAGAGTTAGGGTTATCTAAACCGAGACAGATAGTAGATCATTCTGGAGAGGCTGAGTTATTCTCTAGCAGTTCCTTCAGGAGTTACATGGAATCTAAAGACAAGGACAAGCAAGGAAATGAAAATGCAGGCAGTGTTATCACAGATAAGAAAGAATGTTGTAGAAAAGGTGGGAATTTCACACGGACGCGTACTTCATCTTCATCTTCCTCGCGATGGTCCAAAGATGAAGTGGAAGCTTTGATTAGACTGGGGGCGGATTTTGATGTGGAGTATGAAGGAAACAGACCTAAAGGGCCTTTATGGGAGGAAATATCCTGTGTGATGGAGAAGCTTGGATATGATCGGAGTGCCAAGGGATGCAAAGAGAAATGGGTGAAGGAGAAGAACAAGAAAAAGTCTGAGGATTCAAAGATGCGTCCTTATTTTCACCAGTTTGACACTCTCTGCAGTAGTGAAAAGCCCAAGAGGATGGAGGAATCAGTGGGTTCAAGTAAGAATCAAGTTTGTCCAAAAAACAAAAGGATCAAGTGA 909 0.429 MQSSSSLLSVSLGKRARGKLKSVAIRFKTYLVRLSCSIRRQARKQAEAKALSDPREERVCIIERHEDSFLYGQQSTCSQIEELELSDMKSTVSHSEQLQSSELKQIDSHSKEPKLSKRKQTASHSKELGLSKPRQIVDHSGEAELFSSSSFRSYMESKDKDKQGNENAGSVITDKKECCRKGGNFTRTRTSSSSSSRWSKDEVEALIRLGADFDVEYEGNRPKGPLWEEISCVMEKLGYDRSAKGCKEKWVKEKNKKKSEDSKMRPYFHQFDTLCSSEKPKRMEESVGSSKNQVCPKNKRIK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0008 302 MobiDBLite consensus disorder prediction 154 173 - -
Bisa04g0008 302 Pfam Myb/SANT-like DNA-binding domain 196 263 IPR044822 -
Bisa04g0008 302 SMART sant 194 256 IPR001005 -
Bisa04g0008 302 MobiDBLite consensus disorder prediction 279 302 - -
Bisa04g0008 302 SUPERFAMILY Homeodomain-like 196 256 IPR009057 -
Bisa04g0008 302 Gene3D - 198 258 - -
Bisa04g0008 302 MobiDBLite consensus disorder prediction 105 134 - -
Bisa04g0008 302 ProSiteProfiles Myb-like domain profile. 190 250 IPR001005 -
Bisa04g0008 302 PANTHER FI21293P1 192 291 - -
Bisa04g0008 302 MobiDBLite consensus disorder prediction 91 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0008 Bisa-ChrBisa04 282435 285746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0008 196 276 Trihelix Transcription Factor Family AT1G76880 37.778 1.03e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa04g0008 Myb_DNA-bind_4 1.5e-10 CL0123