Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3871 ATGGCACTCAATGGCACTGGTAACACAATCCCAACCCTAATCCTAATCCTTCTTGCATGTCTTCTTCCCTCCTCCTCCGGGGCTCCCGAAGCCGAATTGCTTCTCAAGTTCAAGAGCTCCCTCCTCGAAAACGACAACAAACTGTTGACATGGAACCAGTCCTTCCCTCCTTGCGTCGCTGACAAAGCCAATTGGGAAGGCGTTCTCTGCGTAGATGGCAAGGTCTGGGGCTTGAAACTCGAGAACTTGGGGCTCAAGGGGGTCGTGGATGTGGAAGCCCTCAAGGGCCTCCCAGATCTCCTGACGCTAAGCTTAATGAACAACGATTTTGATTCCGCTTGGCCAGAGTTCAACCAATTATCCGAGATTAGGACCCTTTACCTTTCCCATAACAGGTTTTCAGGTGTCATTCCTGATCAAAGCTTCCAAGGCATGGATCTCAAGAAAATCCATTTGTCCCACAATCAGTTCACGGGTCCCATTCCCTCTTCCTTGACATCATTATCCAGGCTTAAAGAGTTAAGGCTTGAGAACAACCAGTTTCAAGGCTCCATTCCCCAATTTACTCCCGACTACTTCACCTCATTTGACGTATCTAATAATCAGTTGGCAGGTCAAATACCTCCCGCCCTCAGTAAGATGCCTGCCTCTTCCTTTTCTGGTAATGGAGGGCTGTGTGGAGCTCCATTGGAAGCATGCAAATCTTCCGGGTCCGGGTCCAGTGCCGGGGCCGGGGCCGGCTCCAAGGGTTCCTCGGTGGTGAGTATTATTGTGGTAGCCATAGTTGTTGGAGTGGCGCTAGTTGTGCTAATAGGAGCAATGTTGATCATGTATCGGAGAAGAAACAAAGCAGCGGGGTCAGTGGAGAATCCAACAGCATCAAAGCCCCCAAAGAAAACAAGTGAGAGGGAAGTAGATGACGGCAGTAGTCACTCGGTATCGTCAAAAGGCTCCTCCATCCACGGCAGAACAAAAAGAGCAGATAACATCAAGCTGTCGTTTGTGAAAGATGACAGAGAAAGGTTTGATTTGCAAGAATTGCTCAAAGCATCGGCTGAGGTATTGGGGAGTGGTTGCTTCAGTTCTTCCTACAAGGCTGCTTTGCCATCTGGCACAGCGATTGTGGTGAAAAGGTTCAAGCAAATGAACAATGTTGGAAGGGATGAGTTCCAAGAGCACATGAGAAGGATCGGAAGGCTAGAACATCCTAACTTGCTTCCTCTGGTGGCTTACTATTACAGAAAGGAGGAGAAGCTGTTGGTTACCGACTACGTTAAATATGGAAGCTTGGCCGTTCGCCTCCATGGACACCAAGGGTTGGGGCAGCCATCCCTTGACTGGGCGATGAGGTTAAAGGTTGCAAAAGGCATAGCAAGAGGTCTAGAATATCTGTACAAGGAGATGCCAAGCCTAATAGCACCCCACGGGCATCTAAAATCCTCCAACGTTCTTATTGGGGAATCCTTCGAGCCTCTGTTGAATGACTATGGGTTGGTGCCGGTGATCAATCAGGAGCTTGCTCAGGACACCATGGTGATCTACAAGTCTCCTGAGTATCTCCAAAACGGGAGGGTCACCAAGAAGACGGACGTATGGAGTCTTGGAATACTTCTTGTGGAGCTTCTAACTGGCAAGTTCCCTGCTAACTTTCTACATCAAGGCAAAAAAACTGAGATGGGTTTGGCCAATTGGGTGTGTTCTGTGGTCCCACAAGATTGGAACAGTGAGGTGTTTGATGAAGAAATGGGTGACATCAGCCGCAGCCAAGGGGAGATGTCCAAACTCATGAACATTGCCTTGGATTGTTGCCAAGGGGACGTCGACAAGAGATTGGATCTCAAAGAAGCTGTCGACAAAATTCAAGAGGTGAAGGAGATCGACGATGTTAAAGACGGAATCGAAGATGTTTTAAAGGAGATGGACGATGATAAACCCTAA 1938 0.4856 MALNGTGNTIPTLILILLACLLPSSSGAPEAELLLKFKSSLLENDNKLLTWNQSFPPCVADKANWEGVLCVDGKVWGLKLENLGLKGVVDVEALKGLPDLLTLSLMNNDFDSAWPEFNQLSEIRTLYLSHNRFSGVIPDQSFQGMDLKKIHLSHNQFTGPIPSSLTSLSRLKELRLENNQFQGSIPQFTPDYFTSFDVSNNQLAGQIPPALSKMPASSFSGNGGLCGAPLEACKSSGSGSSAGAGAGSKGSSVVSIIVVAIVVGVALVVLIGAMLIMYRRRNKAAGSVENPTASKPPKKTSEREVDDGSSHSVSSKGSSIHGRTKRADNIKLSFVKDDRERFDLQELLKASAEVLGSGCFSSSYKAALPSGTAIVVKRFKQMNNVGRDEFQEHMRRIGRLEHPNLLPLVAYYYRKEEKLLVTDYVKYGSLAVRLHGHQGLGQPSLDWAMRLKVAKGIARGLEYLYKEMPSLIAPHGHLKSSNVLIGESFEPLLNDYGLVPVINQELAQDTMVIYKSPEYLQNGRVTKKTDVWSLGILLVELLTGKFPANFLHQGKKTEMGLANWVCSVVPQDWNSEVFDEEMGDISRSQGEMSKLMNIALDCCQGDVDKRLDLKEAVDKIQEVKEIDDVKDGIEDVLKEMDDDKP 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3871 645 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Bisa03g3871 645 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
Bisa03g3871 645 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 91 185 - -
Bisa03g3871 645 MobiDBLite consensus disorder prediction 285 324 - -
Bisa03g3871 645 MobiDBLite consensus disorder prediction 296 310 - -
Bisa03g3871 645 Pfam Protein tyrosine and serine/threonine kinase 353 619 IPR001245 GO:0004672|GO:0006468
Bisa03g3871 645 FunFam pollen receptor-like kinase 1 318 424 - -
Bisa03g3871 645 SUPERFAMILY Protein kinase-like (PK-like) 353 621 IPR011009 -
Bisa03g3871 645 Gene3D Transferase(Phosphotransferase) domain 1 425 636 - -
Bisa03g3871 645 SUPERFAMILY L domain-like 30 227 - -
Bisa03g3871 645 ProSiteProfiles Protein kinase domain profile. 349 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3871 645 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 626 IPR046959 -
Bisa03g3871 645 Gene3D Ribonuclease Inhibitor 25 126 IPR032675 -
Bisa03g3871 645 Gene3D Ribonuclease Inhibitor 127 237 IPR032675 -
Bisa03g3871 645 Gene3D Phosphorylase Kinase; domain 1 314 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3871 Bisa-ChrBisa03 82859368 82862808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3871 14 641 Receptor kinase-like Gene Family AT5G35390 50.389 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa03g3871 PK_Tyr_Ser-Thr 4e-29 CL0016