Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3863 ATGAAGCCGCAGGCAGACGTTACCGGAGCCGGAGCCGCCTCCGCCGCTGCACCACCGAATCCCTGCGAAGGAGCAGAGAAGAAGAGCATAAATCCAGAGCTTTGGCAAGCTTGTGCGGGGCCGCTGGTGAACCTGCCGCCTGCTGGTACCCACGTGGTCTACTTCCCTCAAGGTCATAGCGAACAGGTTGCAGCATCTTTAAAGAAGGATGTGGATGCCCAGATCCCAAACTATCCAAATCTTCCCTCGAAGTTACTCTGTCTTCTTCACAATGTCACCTTGCATGCTGACCCAGAAACTGATGAAGTATATGCACAGATGACACTTCAACCAGTGCCTTCTTTTGACAAGGATGCATTATTAAGATCTGATCTTGCTCTCAAGTCTAGTAAAACACAACCTGAGTTTTTCTGTAAACAACTGACAGCAAGTGATACAAGTACTCATGGAGGTTTTTCTGTACCCCGCCGTTCAGCAGAGAAGATTTTCCCCCCTCTTGATTACTCTATGCAACCACCTGCTCAAGAACTTGTGGCCAGGGATTTGCATGACAATGTTTGGACATTCCGCCACATATATCGTGGACAACCAAAGCGTCACTTACTTACAACTGGGTGGAGTCTATTTGTCAGTGGAAAGAGGCTATTTGCTGGGGACTCCGTTTTGTTTATAAGAGATGAAAAGCAGCAGCTTCTTCTGGGTATTAGACGAGCTAACAGACAACCCACTAATATATCATCCTCAGTACTATCAAGTGATAGTATGCATATTGGAATTCTTGCAGCAGCAGCTCATGCTGCAGCAAACAACAGTCCCTTCACTGTGTTTTATAATCCTAGGGCTAGTCCCTCAGAATTTGTTATTCCTTTAGCCAAGTACTACAAGGCAGTGTATAGTCACCATATATCTCCTGGCATGCGCTTTCGAATGATGTTTGAAACTGAAGACTCCGGAACACGAAGGTATATGGGTACAATTACTGGTATCAGTGATCTGGATCCTGTGAGATGGAAAAACTCGCAATGGCGTAATTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGAGAAAGGCGTAGTAGAGTTTCAATATGGGAAATTGAACCAGTGACTGCTCCATTCTTCATCTGTCCACCTCCATTCTTCAGATCCAAGCGGCCAAGACAACCAGGAATGCCTGATGATGATCCCTCTGATTTTGATAACCTTTTCAAGCGGACAATGCCTTGGCTTGGTGATGATATATGCATGAAGGATCCTCAAGCACTCCCTGGCCTTAGCTTAGTTCAATGGATGAACATGCAGCAGAATCCTGCACTGTCTAGCTCACTGCAGCCAAATTACATGCAATCCTTGTCTGGATCTGTCCTGCAAAATCTTCCTGGTGCAGATATTGCCCGTCAGCTGGGATTTTCTACTCCACAGATTTCTCAGCCGAACAATGTAACCTTCAATTCTCAGAGGTTACTTCAGACTGCGCAACAGCTTGATCATCTTCAGAAGATACCATCTACATCTAGCCCACTGGGAGCAGTCATGCAGCCACAGCAACAGTTGAATGATATCACTCAACAACCTAGGCAGAATTTGGGAAATCAAACTCTACCACAGAGTCAAGTTCAGACACAAGTTGTGCATCCCCAAAATCTTGTCCAAACTAACAATATTCTTCAACAGCAACAACCATCCATTCAAAACCATCAACTGCATAGAAGCATCCCTCAGAACCTGCCGCAGCCACAGCAGCAACAGACAATTATGGGTCAGACTCAACAGCAAAATCTTATCCAGTCCCCTATGTCTGACAATGTCAATCAACAATTGCAGATGTCTGACCACCACATTCAGCTTCAATTGTTACAGAAGCTTCAACAACAGCAACAGACATTCTTGGCGCAGCAATCAGTCATGCAGCAGCCTGCTCAACTTACTCAAATCCAAGACCAGCAGAGGCAGCTTTTAGATGCAGCTCAGAACTTCTCGAGGTCCCTCACACCAAGTCAAGTGCTGGAGATTCCTCCAATACTCCAAAACTCCCTTCCTGAGGCTAATTCGATTCCACATCAGATGACAAAGATTAATGGCCAGACCAATATTCAGTTCTCGCATCTGGCCCACCAGCCAAAGCTTCAACAACAGCAACCTGTCATGCTGTCTGAAATTTCTGGGCATGTTGGACTTCCCCCTACTACAACCAACCATGTCTCTGTGGCTGGTAGTAGTATATTGACTGCAGCAGCTGGAGCAGGGCAATCTGTAATTACTGATGACATTCCATCTTGTTCCACTTCACCTTCCACTGATAACTGTGCCAATGCACTTCCACATATGAATTCCCGGATCCATAGGAACACAACAATTGGGGATGACATGGCTCAGTCTGCAGCCACAATCTTGAGTCCAAGTGCCTTAGAAACCATGTCATCAAATGCAAGCTTGGTGAAAGATTTACAGCCAAAATCTGAAGTTAAGCCTTCTTTAAACATATCAAAAAATCAGAATCAAGGGAATTTTGCCCCTCAGACTTACTTAAATGGTGGAGCTGCACAGACTGATTATTTGGATACATCATCTTCTACAACTTCAGTTAGCCTTTCTCGGAATGACACTCATATGCATCATAATAACAACCCATTATCTTATAATCCGCAGCCAATGCTGTTTAGAGATAGTAGTCAAGATGGGGAAATTCAGGCAGATGCTAGGTGCAATGGTCCATATGGCAATAACATTGATGGTCAATTAGGAATGCCGCTAAATCCAGATTCTCTTTTAACAAAAGGTGCAGTGGGGCTGGGGAAGGATTTGTCGAATAACTTTTCTTCGGGAGGAATGCTTAGTAATTATGACAATAATAGAGATGCTCAGCAGGAACTATCATCTTCAATGGTTTCACAGACATTTGGAGTTCCTGATATGACATTTAATTCAATTGATCCAACAATAAACGACAGTAGCTTCTTAAATAGGGGTACATGGGCCCCACCTCCACCGCCACCACCGCAGTTTCAACGGATGAGGACATATACCAAGGTATACAAACGTGGAGCTGTGGGTAGGTCCATAGACATAACCCGGTATTCAGGTTACGAGGAGCTTAAGCAGGATCTGGCTCGTAGATTTGGCATAGAGGGACAGTTGGAGGATCGGCAAAGGATAGGCTGGAAACTTGTTTATGTTGATCATGAAAATGATGTTCTGCTAGTGGGGGATGACCCCTGGGAGGAGTTTGTAAACTGTGTCCGCTGCATTAAAATACTTTCTCCGCAAGAGGTGCAACAGATGAGCTTGGATGGAGATTTTGCCAATGGCGGCCTTCCAAATCAAGCCTGTAGCAGCTCTGATGGTGGAAATACTTAA 3357 0.4507 MKPQADVTGAGAASAAAPPNPCEGAEKKSINPELWQACAGPLVNLPPAGTHVVYFPQGHSEQVAASLKKDVDAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVPSFDKDALLRSDLALKSSKTQPEFFCKQLTASDTSTHGGFSVPRRSAEKIFPPLDYSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGMPDDDPSDFDNLFKRTMPWLGDDICMKDPQALPGLSLVQWMNMQQNPALSSSLQPNYMQSLSGSVLQNLPGADIARQLGFSTPQISQPNNVTFNSQRLLQTAQQLDHLQKIPSTSSPLGAVMQPQQQLNDITQQPRQNLGNQTLPQSQVQTQVVHPQNLVQTNNILQQQQPSIQNHQLHRSIPQNLPQPQQQQTIMGQTQQQNLIQSPMSDNVNQQLQMSDHHIQLQLLQKLQQQQQTFLAQQSVMQQPAQLTQIQDQQRQLLDAAQNFSRSLTPSQVLEIPPILQNSLPEANSIPHQMTKINGQTNIQFSHLAHQPKLQQQQPVMLSEISGHVGLPPTTTNHVSVAGSSILTAAAGAGQSVITDDIPSCSTSPSTDNCANALPHMNSRIHRNTTIGDDMAQSAATILSPSALETMSSNASLVKDLQPKSEVKPSLNISKNQNQGNFAPQTYLNGGAAQTDYLDTSSSTTSVSLSRNDTHMHHNNNPLSYNPQPMLFRDSSQDGEIQADARCNGPYGNNIDGQLGMPLNPDSLLTKGAVGLGKDLSNNFSSGGMLSNYDNNRDAQQELSSSMVSQTFGVPDMTFNSIDPTINDSSFLNRGTWAPPPPPPPQFQRMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFANGGLPNQACSSSDGGNT 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3863 1118 FunFam Auxin response factor 1001 1095 - -
Bisa03g3863 1118 Pfam AUX/IAA family 1006 1091 IPR033389 -
Bisa03g3863 1118 FunFam Auxin response factor 135 239 - -
Bisa03g3863 1118 MobiDBLite consensus disorder prediction 1 27 - -
Bisa03g3863 1118 Gene3D - 135 238 IPR015300 -
Bisa03g3863 1118 SUPERFAMILY CAD & PB1 domains 1019 1084 - -
Bisa03g3863 1118 Gene3D - 1001 1095 - -
Bisa03g3863 1118 MobiDBLite consensus disorder prediction 848 881 - -
Bisa03g3863 1118 ProSiteProfiles PB1 domain profile. 1006 1090 IPR000270 GO:0005515
Bisa03g3863 1118 FunFam Auxin response factor 301 372 - -
Bisa03g3863 1118 Gene3D - 301 372 - -
Bisa03g3863 1118 Pfam Auxin response factor 263 346 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa03g3863 1118 SUPERFAMILY DNA-binding pseudobarrel domain 126 266 IPR015300 -
Bisa03g3863 1118 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 623 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa03g3863 1118 SMART B3_2 137 239 IPR003340 GO:0003677
Bisa03g3863 1118 CDD B3_DNA 136 228 IPR003340 GO:0003677
Bisa03g3863 1118 Pfam B3 DNA binding domain 137 238 IPR003340 GO:0003677
Bisa03g3863 1118 ProSiteProfiles B3 DNA-binding domain profile. 137 239 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3863 Bisa-ChrBisa03 82770604 82776751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3863 19 488 B3 DNA Binding Superfamily AT1G19220 72.083 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa03g3863 B3 2.9e-19 CL0405