Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3845 ATGATCCCAGATCATGGGTATGAAGAGAAGGGTTCTTCAGATGTGGCCGGAAAAGTGGTGGTGGTGGCAGTGAAAGCTTCGAAAGAGATATCAAGGACTGCGTTAGTGTGGGCTTTGACTCATGTCGTTCAACCTGGAGATTGCATTAAGCTTTTGGTCCTCATTCCGGCTTTCTCCTCAAGTAAGAGGATATGGGGGCTTTCTAGATTTACGACTGATTGCACTACCAGCCAGTGGAGATCCCATATAGGAACATTTTCAGATCAGAAGGAGATTATTGCCAATTCATGTTCTCAATTAGTGCTTCAACTCCATGATCTTTATGATCCAGAAAAGATAAAGATCAGAGTAAAGATTCTCTCTGGCTCTTTATGTGGAGCAGTGGCTGCTGAAGCCCAGAAAGTCCAATCAAGCTGGGTCGTGTTGGACAAAAAATTGAAACATGAAAAGAAATACTGCATGGTGGAGTTGCGTTGCAATATCGTAACCGTGAAGGGATCTCGGGCAGAGGTTCTTCGTTTGAATTTGAACAGTTCACCAAAGATGGGCCTTGAAGGGGGTTGTCCATTGTCACCAGAGCTCAATTCATATCCAAGGAACTCAAATGGCAAGTCTGAGTATCGAGTTACGATCAGAGGCCCAGCCGTTACTCCTGCAAGCAGTCCAGAACAAGGGTCGCCATTAACTGCAACTGACGTTGGAACATCATCAATATCAAGCTCAGATCCTGGGACTTCACCATTTTTCCACTCTGATATATATGGGAGAAGGAGAGACTTTCCCTTTGTTCATGAAGAACTAAAAAATATGGAGGAAAGTGAATCTGACTCGGAGAGTGAAAAGATGAGTTTATCATCCAAAAGTTCATACTTCAACCCATGGATTGCAGATGTGATGAGCACTGATGGTGAATTCTCAAAACATAGTGACAGTATGCTAAGACCCAGTGATAAGTCTTTGGTGTCTGCCTACGAAACCATGCTTCAGAAAGTATCCAAGTTGGATCAAGAACCTGGTATAGGAGTTCTTCATGGTAAAATTGATGTTAACTTGAGCAAAAGTGTTAGAGAAGCAATTTCATTGTCAATAAATGCACCTCTGGGCCCTCCTCCCTTGTGCTCTATTTGTCAGCACAAGACACCTGTATTTGGGAATCCTCCAAGGTGGTTTACATTTGCTGAACTGCAACTTGCCACTGGTGGCTTCTCACAAGCAAATTTCTTGGCGGAAGGTGGATTTGGTTCTGTACACCGCGGTGTCCTACCGGATGGGCAGGTCATTGCTGTCAAGCAGTATAAATTAGCCAGTACTCAAGGTGATAAAGAATTTTGCTCAGAAGTCGAGGTCTTAAGCTGTGCACAGCATCGTAATGTTGTGATGCTAATTGGATTTTGTGTGGAGGATGGAAGAAGATTGCTGGTTTATGAATATATCTGCAACGGTTCTCTAGATTCTCATCTTTATGGACGAAAACAGAATGTACTGGAATGGTCTGCAAGACAAAAAATCTCAGTCGGGGCAGCTCGTGGTCTGAGGTACCTCCATGAAGAATGCAGAGTGGGCTGTATCGTTCACCGTGATATGCGGCCCAACAATATCCTCCTAACTCATGATTTTGAAGCATTAGTGGGAGACTTTGGACTTGCCAGATGGCAGCCAGATGGTGATATGGGTGTTGAAACCAGGGTGATTGGCACATTCGGGTATTTGGCCCCAGAATACGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTGTATTCCTTTGGGGTAGTACTCTTGGAGCTTATTACAGGATGGAAAGCTATTGATATAAACCGGCCAAGAGGTCAGCAATGCCTCACTGAATGGGCACGTCCACTGCTTGAAAGAGATGCCATTCGTGAACTGATTGATCCAAGCTTGAAAAACTGCTACATCGATGAAGAGGTTCATCGCATGATGCAATGTTGCTCGTTGTGCATCCGGCGGGATCCTCATTTCAGGCCTCGAATGTCTCAGGTTCTCCGGATGCTGGAAGGCGACGTTCTTATGTGA 2037 0.4467 MIPDHGYEEKGSSDVAGKVVVVAVKASKEISRTALVWALTHVVQPGDCIKLLVLIPAFSSSKRIWGLSRFTTDCTTSQWRSHIGTFSDQKEIIANSCSQLVLQLHDLYDPEKIKIRVKILSGSLCGAVAAEAQKVQSSWVVLDKKLKHEKKYCMVELRCNIVTVKGSRAEVLRLNLNSSPKMGLEGGCPLSPELNSYPRNSNGKSEYRVTIRGPAVTPASSPEQGSPLTATDVGTSSISSSDPGTSPFFHSDIYGRRRDFPFVHEELKNMEESESDSESEKMSLSSKSSYFNPWIADVMSTDGEFSKHSDSMLRPSDKSLVSAYETMLQKVSKLDQEPGIGVLHGKIDVNLSKSVREAISLSINAPLGPPPLCSICQHKTPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRKQNVLEWSARQKISVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLLELITGWKAIDINRPRGQQCLTEWARPLLERDAIRELIDPSLKNCYIDEEVHRMMQCCSLCIRRDPHFRPRMSQVLRMLEGDVLM 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3845 678 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 478 678 - -
Bisa03g3845 678 ProSiteProfiles Protein kinase domain profile. 402 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3845 678 SUPERFAMILY Protein kinase-like (PK-like) 381 673 IPR011009 -
Bisa03g3845 678 MobiDBLite consensus disorder prediction 217 245 - -
Bisa03g3845 678 PANTHER OS01G0750732 PROTEIN 333 677 - -
Bisa03g3845 678 MobiDBLite consensus disorder prediction 215 245 - -
Bisa03g3845 678 CDD STKc_IRAK 408 674 - -
Bisa03g3845 678 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 477 - -
Bisa03g3845 678 Pfam Protein tyrosine and serine/threonine kinase 406 672 IPR001245 GO:0004672|GO:0006468
Bisa03g3845 678 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
Bisa03g3845 678 Gene3D Transferase(Phosphotransferase) domain 1 478 677 - -
Bisa03g3845 678 Gene3D Phosphorylase Kinase; domain 1 374 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3845 Bisa-ChrBisa03 82392798 82397172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3845 364 668 Trihelix Transcription Factor Family AT1G68690 50.809 1.70e-100 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Bisa03g3845 PK_Tyr_Ser-Thr 6.8e-42 CL0016