Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3833 ATGTCTTCTGATTCTGAAGTGAACTTCCCCGATTCATCATCCCTAACTGCATTACAATTGGACGAGCCCCAAATTCGAAGACTATCTCTGCTTCTCCCTCTGATTCTCGGGTTAGCGCCTCCGCGTCAAGCCACAGAATCGGAGGCCGGGAGCCACCGCGGTCGAGTCCGGGTCATCATAGTTGACCCTTCTGCGGGAGCCATGATCGTGATCGAAGGCTCCGGAGACCTCCAATCGATGTTCCAAGGGCTATCGGTGAAGCCCGGGGTGCTGCCGGCGTCCAAGGATTCGATTCAGGCTATGCCTAGAGTTGCGGTGACTGAAGAAGGCGCGGATTGTTCGATCTGCTTGGAAGCTTACGAAGTCGGTGGCGAAGCAAGGGAAATGCCTTGCAAACATAGGTTTCACTCTGGCTGTATTGAGAAGTGGTTAGGGATTCACGGGTCTTGTCCGATTTGCCGGTTTCTGATGCCGGCGGAGGAGGAAAACAAAACCGCCGGCGGTAGCGACGGCGAGCAGGACGACGGCGGCGAGAGGAGAGAGAGCGGTGAGGGGTCGATATCAGTGAGCGTATGGGTCAGGTCCATCGACGATGACGACGACCCGATGGATGTGGATACGGATCCGGGTAGTGGAGCAGGTGAATCCAATTCTGATTCACGAGAAGGAAATTCCAATTCCGCAGCTGATGATGACTCATCGATGAATCAAGAGCCACAAGACATGGAATTCTGA 735 0.5456 MSSDSEVNFPDSSSLTALQLDEPQIRRLSLLLPLILGLAPPRQATESEAGSHRGRVRVIIVDPSAGAMIVIEGSGDLQSMFQGLSVKPGVLPASKDSIQAMPRVAVTEEGADCSICLEAYEVGGEAREMPCKHRFHSGCIEKWLGIHGSCPICRFLMPAEEENKTAGGSDGEQDDGGERRESGEGSISVSVWVRSIDDDDDPMDVDTDPGSGAGESNSDSREGNSNSAADDDSSMNQEPQDMEF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3833 244 MobiDBLite consensus disorder prediction 165 182 - -
Bisa03g3833 244 MobiDBLite consensus disorder prediction 163 244 - -
Bisa03g3833 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 159 IPR013083 -
Bisa03g3833 244 SUPERFAMILY RING/U-box 107 158 - -
Bisa03g3833 244 SMART ring_2 113 153 IPR001841 -
Bisa03g3833 244 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 59 158 - -
Bisa03g3833 244 MobiDBLite consensus disorder prediction 211 244 - -
Bisa03g3833 244 FunFam E3 ubiquitin-protein ligase RNF181 82 160 - -
Bisa03g3833 244 Pfam Ring finger domain 112 154 IPR001841 -
Bisa03g3833 244 ProSiteProfiles Zinc finger RING-type profile. 113 154 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3833 Bisa-ChrBisa03 82184371 82185105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3833 26 194 C3H Transcription Factor Family AT1G26800 41.520 1.57e-37 129