Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3817 ATGGATGGATATTTACCGAATTATAAGTTGGGGAAAACACTTGGCATTGGATCCTTTGGCAAGGTGAAAATTGCAGAGCATGTATTGACTGGCCATAAAGTTGCCATTAAGATTCTTAATCGGCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTATTCATGCATCCTCACATTATACGACTTTATGAGGTCATAGAAACTCCAACCGACATATATGTCGTTATGGAGTATGTAAAATCAGGGGAGCTCTTTGATTATATAGTTGAAAAAGGTAGGCTGCAAGAAGATGAAGCCCGTAATTTTTTCCAGCAGATAATCTCTGGTGTGGAGTATTGTCATAGGAATATGGTGGTTCATAGAGACCTAAAGCCTGAGAATCTGCTTTTGGACTCCAAATGCAATGTTAAGATTGCTGACTTTGGTTTGAGCAATATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGTGGAAGCCCAAACTATGCTGCTCCAGAGGTTATATCTGGAAAATTGTATGCTGGACCTGAAGTTGATATCTGGAGCTGTGGTGTAATTTTATATGCTCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCAAACCTCTTTAAGAAAATAAAGGGTGGGATTTATACCCTTCCCAGCCATCTGTCACCTGGTGCTAGAGATTTGATACCGAGGATGCTTGTGGTTGATCCTATGAAGAGAGTGACCATACCTGAGATTCGCCAACATCCATGGTTCCAAGTTCATCTGCCCCGTTATTTAGCAGTGCCACCACCAGATACAGTGCAACAAGCCAAAAAGATTGACGAGGAAATTCTTCAGGAAGTGGTTAACATGGGATTTGACAGGACTCAACTGGTTGAATCTCTCCGCAATCGGATGCAAAATGAGGGTACTGTAGCATACTATTTGTTATTGGACAATCGGTTTCGTGTTTCCAGTGGGTATCTTGGAGATGAGTTTCAAGAGACAATGGATTCTGTTAACCATCATCCCAGTGAAGTTGCTACTCCAGCTACTGGTCACCGCTTTCCAGGGTATATGGATTATCCAGGAGTAGGATTGAGACCACAGTTATCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGTGCTCAACCTCGCGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTAAATGTATGTTGGAAAAAAATTGGATTCTACAACATGAAGTGCAGATGGATTGCTGGCACTCCTGGTCAGCTTGAAGGAATGGTGGACAATACTTCGTATAGTAGTCCTTACTACAGAGATGATTCCACCATCATTGAGAATGATGATGTTCCTAAGTCAAATGTGGTCAAGTTTGAAGTCCAGCTTTACAAAACTCGGGAGGACAAATATCTGCTTGATCTTCAAAGGATTCAGGGACCCCATATTCTCTTTTTGGATCTTTGTGCTGCCTTCCTTTCGCAGCTTCATGTCCAGTAG 1506 0.4137 MDGYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQVHLPRYLAVPPPDTVQQAKKIDEEILQEVVNMGFDRTQLVESLRNRMQNEGTVAYYLLLDNRFRVSSGYLGDEFQETMDSVNHHPSEVATPATGHRFPGYMDYPGVGLRPQLSVERKWALGLQSRAQPREIMTEVLKALQELNVCWKKIGFYNMKCRWIAGTPGQLEGMVDNTSYSSPYYRDDSTIIENDDVPKSNVVKFEVQLYKTREDKYLLDLQRIQGPHILFLDLCAAFLSQLHVQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3817 501 SMART serkin_6 8 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3817 501 SUPERFAMILY KA1-like 317 500 IPR028375 -
Bisa03g3817 501 SUPERFAMILY Protein kinase-like (PK-like) 6 277 IPR011009 -
Bisa03g3817 501 FunFam Non-specific serine/threonine protein kinase 1 338 - -
Bisa03g3817 501 Pfam Protein kinase domain 8 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3817 501 CDD AMPKA_C 376 498 - -
Bisa03g3817 501 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 281 321 IPR015940 -
Bisa03g3817 501 SUPERFAMILY UBA-like 271 319 IPR009060 GO:0005515
Bisa03g3817 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Bisa03g3817 501 SMART uba_6 283 320 IPR015940 -
Bisa03g3817 501 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Bisa03g3817 501 Pfam UBA/TS-N domain 282 318 IPR015940 -
Bisa03g3817 501 Pfam Kinase associated domain 1 458 499 IPR001772 -
Bisa03g3817 501 FunFam Non-specific serine/threonine protein kinase 2 87 - -
Bisa03g3817 501 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 452 500 IPR001772 -
Bisa03g3817 501 PANTHER SERINE/THREONINE KINASE 7 325 - -
Bisa03g3817 501 Gene3D Kinase associated domain 1, KA1 382 500 - -
Bisa03g3817 501 CDD UBA_SnRK1_plant 282 322 - -
Bisa03g3817 501 Gene3D Transferase(Phosphotransferase) domain 1 1 343 - -
Bisa03g3817 501 FunFam Non-specific serine/threonine protein kinase 382 499 - -
Bisa03g3817 501 CDD STKc_AMPK_alpha 5 260 - -
Bisa03g3817 501 ProSiteProfiles Protein kinase domain profile. 8 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3817 Bisa-ChrBisa03 81561743 81565850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3817 8 260 CBL-interacting serine-threonine protein kinases AT4G24400 53.150 4.02e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Bisa03g3817 Pkinase 1.1e-80 CL0016