Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3816 ATGGAAAACATGGGAAACGGGAACTTTTCTGAATTCTTGTCTGAGCTGATAGTTTTGGCCGATGAGGTTGCTTCCTTTGCTAAGGACTGTGAAATTGAAACAAATGTTTTTACTGAGTTTGCCATGTTGGTTGAGAAATTTGAACCAATCTTCAGAGCTTTCAGAGACAAAAGCACACTCATGGACGAGCCATCTATTAGAAAATCATTGGAATCTCTTGAGAATGAGCTTAGGCGTGCTAAAACTTTGACCAACGACCCCAATCTGAAACATCCCATTAAACAGATTGAGGACATGACTCATGATCTTGGTCGATCTTTAGGCCTGCTTCTAGTGTCCACCCTTGAAGTGTCCCCTGATTTTAGAGAAATGATCGGTGCATTGCAAAGAGAGTTGATGAATGCAAAATTTGGTGGAGTTACGAGTCCATCTTCAAATTCAAGTTCAGAGTTAGTCAGTGATGTAAAGCTTGAAGGGGAAATAGAAGAAGAAGCAGTCAATTTTACTATTGACGATTTTGTTTTGTACCTCAAACAAGGTAATGATAAAGAACTTGCAGTTGCACTTACAAGACTAAAGGAGTACTTCAGAGGTGAAATGGCGGATAGTGGTTTAATCAACGAGGAAGCACTTGTTGCCATTCTTTCCAATCGACTAGGTTCAAGTAAGGCAGATAGTAGGTTGTCCATCATTCAATTACTAAGAAGTATTGCTGTCAACAATAACGAGAGAAAGGAGAAGATGGCAGAGACTGAGTTTTTAGCAGCTTTAGTGAAGTCTCTAACACGGGATGCAGAAGAGAGGAGGGAAGCAGTGGGGCTTTTGCTAGACCTCTCTGACCTTCCTGCAGTTAGGCGGCGAATTGGAAGAATTCGGGGTTGTATTGTAATGCTAGTTGCTATCCTTAATGGAGATGATCCTGTCGCTTCACATGATTCAGCAAAGTTGTTGGATATATTGTCTAGTAATTCTCAAAATGCACTTCTTATGGCTGAGGCTGGTTACTTCAATCCACTTGTGCAGTATCTGAAGGAAGGCTCGGACATGACCAAGATCCTCATGGCAACAGCACTTTCTAGATTGGAGCTCACTGATCATAGCAAACTCTCCCTTGGAGAAGATGGTGTGATCGAGCTCCTAGTCAACATGTTTAAGTCTGGGAAGCTTGAGTCCAAGTTATCAGCTCTAAATGCGCTGCAAAATTTGTCAAGCTTGACAGAAAATGCACAACGTTTGATCAGATCAGGAATTGTGGCATCTCTGCTTCAACTTCTTTTCTCAGTGACATCCGTACTCATGACTCTGCGGGAACCTGCATCGGCTATTCTTGCAAGAATTGCTCAGTCAGAGCCCGTACTTGTCAATCCAGTTGTAGTTCATCAGATGCTCTCACTTTTGAATCTCTCCAGCCCGATAATTCAGAGTCACCTATTAGAAGCACTAGCTAGCATTGCTGCTCATCCTGATGCATTGAAGGTTAGAAGAAAAATGAAGGAAAAAGGTGCACTTCAACTTCTTTTACCTTTTCTGATGGAAACCAACACTGGAATTCGGAGTAAGGCATTGCATTTGCTGTACACTCTCTCGAAAGATCTAACAGAAGAGTTGACAGAACATCTTGATGATACCCATCTTTTTAATATTGTCAATATCATCTCATCATCAACATTGGATAGTGAAAAAGCTGATGCTGTTAGTTTACTAAGTAATCTTCCTGTTAGTGATAAAAAAGTGACTGGTATACTCACGAAGGCAAATTTGTTGCCAATTTTAATATCCATTATGTCTTCAAGCACGGGAAGTAATTCACCCGCAAGAAGTAACTTAGCACAGAGTGTTGCTGGTCTTATGATCTGGTTCACAAATCCTTCAGACAAGAAACTACAACTTCTCTCAGCAGAACAAGGGTTGATTCCTCTGCTTGTAAAATTTCTCTCCACCGGTTCACCAATCACAAAATCCAGAGCTGCAACCTCACTTGCTCAATTATCTCAGAATTCTTTGTCCCTTAGGAGGTCTAGAAAATCTACATGGTTTTGTGTTCCTCCTTCTATAGATGCACGTTGTGAAGTTCACGATGGATATTGCGTTGTGAAAAGTACATTTTGTCTTGTCAAAGCGGGTGCTGTTCCTCTGCTTATCCAAATACTAGAAGATAAAGAGAAGGAAGCTGTTGAAGCCGCTCTGACTGCTCTATCGACTCTCTTGCAAGATGAAATCTGTGAAGGTGGTGCTAACTGCATTGCCAAATTGTCCGGAGTTCAGGCTATTGTAAAGGTTTTAGAAGTAGGGGATGTAAAGGTTCAAGAAAAAGCACTATGGATGTTGGAGAGAATATTCAGGGTTGAAGAGCAAAGAGCTAAATATGGTGGATCTGCTCAGGTTGTTCTTATTGACCTCGCCCAGAAGAGCGATTCTCGATTGAAGTCAACAGTTGCAAAAGTATTAGCAGAGCTAGAGCTCTTGGAAGTTCAGTCAAGTTACTTCTAG 2490 0.4133 MENMGNGNFSEFLSELIVLADEVASFAKDCEIETNVFTEFAMLVEKFEPIFRAFRDKSTLMDEPSIRKSLESLENELRRAKTLTNDPNLKHPIKQIEDMTHDLGRSLGLLLVSTLEVSPDFREMIGALQRELMNAKFGGVTSPSSNSSSELVSDVKLEGEIEEEAVNFTIDDFVLYLKQGNDKELAVALTRLKEYFRGEMADSGLINEEALVAILSNRLGSSKADSRLSIIQLLRSIAVNNNERKEKMAETEFLAALVKSLTRDAEERREAVGLLLDLSDLPAVRRRIGRIRGCIVMLVAILNGDDPVASHDSAKLLDILSSNSQNALLMAEAGYFNPLVQYLKEGSDMTKILMATALSRLELTDHSKLSLGEDGVIELLVNMFKSGKLESKLSALNALQNLSSLTENAQRLIRSGIVASLLQLLFSVTSVLMTLREPASAILARIAQSEPVLVNPVVVHQMLSLLNLSSPIIQSHLLEALASIAAHPDALKVRRKMKEKGALQLLLPFLMETNTGIRSKALHLLYTLSKDLTEELTEHLDDTHLFNIVNIISSSTLDSEKADAVSLLSNLPVSDKKVTGILTKANLLPILISIMSSSTGSNSPARSNLAQSVAGLMIWFTNPSDKKLQLLSAEQGLIPLLVKFLSTGSPITKSRAATSLAQLSQNSLSLRRSRKSTWFCVPPSIDARCEVHDGYCVVKSTFCLVKAGAVPLLIQILEDKEKEAVEAALTALSTLLQDEICEGGANCIAKLSGVQAIVKVLEVGDVKVQEKALWMLERIFRVEEQRAKYGGSAQVVLIDLAQKSDSRLKSTVAKVLAELELLEVQSSYF 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3816 829 SUPERFAMILY ARM repeat 169 456 IPR016024 -
Bisa03g3816 829 SUPERFAMILY ARM repeat 371 784 IPR016024 -
Bisa03g3816 829 Pfam Armadillo/beta-catenin-like repeat 703 735 IPR000225 GO:0005515
Bisa03g3816 829 Gene3D - 167 303 IPR011989 -
Bisa03g3816 829 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 375 417 IPR000225 GO:0005515
Bisa03g3816 829 Gene3D - 694 824 IPR011989 -
Bisa03g3816 829 SMART arm_5 405 448 IPR000225 GO:0005515
Bisa03g3816 829 SMART arm_5 696 737 IPR000225 GO:0005515
Bisa03g3816 829 SMART arm_5 741 781 IPR000225 GO:0005515
Bisa03g3816 829 SMART arm_5 323 363 IPR000225 GO:0005515
Bisa03g3816 829 SMART arm_5 364 404 IPR000225 GO:0005515
Bisa03g3816 829 SMART arm_5 489 530 IPR000225 GO:0005515
Bisa03g3816 829 SMART arm_5 625 665 IPR000225 GO:0005515
Bisa03g3816 829 SMART arm_5 241 280 IPR000225 GO:0005515
Bisa03g3816 829 Gene3D - 313 676 IPR011989 -
Bisa03g3816 829 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 148 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3816 Bisa-ChrBisa03 81528873 81535450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3816 147 829 U-box Gene Family AT1G76390 29.428 6.27e-52 193