LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g3814	ATGGATGTCTGTTGTATAGCTGAAAACGATCGTCAATTTGCGCGATCACCAAACAAAGCTTCAGAGTCTTCACAGTTTCTTCGCCAGATTCACACACCCCACAAATCAGTTTTGCTTCCTTCATTTCTTCCTCCTTCTATGGTAACAAAGAATGTCCAATCCTTCACGGCGGCGGCGGCGGCGGCTGAAGCTCCGCGTCCGACGATCACTCTTCCGCCACGGCCTTCCATGGAGGCCTTCTTCACCGGCGGACCCGGTGCGAGTCCTGGTCCGATGACTCTCGTGTCCAGCTTCTTCTCCGACAACTACCCTGACTCCGACTCCCGCTCTTTCTCGCAGTTGCTCGCCGGGGCTATGGCTTCTCCGCTCGCTCTGGGCGCGAGGTCGGGTTTGTTTGCGGACAATTCCACCGAAAATTCGTCCAAAGAAGGGGCGTCTGAGGATGGAGAGAAGAAGAATTTAGGGTTCAAGCAGAGTAGGCCCGTTAATTTGTTGATTTCTAGTTCCCCATTGTTTACAGTCCCTTCTGGGTTAAGCCCTTCTGGATTGCTTAATTCTCCTGGCTTCTTTTCGCCTCAGAGCCCTTTTGGGATGTCCCATCAACAAGCTCTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCGCATATGCACATGCAAGCTGATTTTCGCCCATTTGCTGAAACAACTGCCAAACCATTGGCAGTGCAGCCATCCTGTACAACGAGCGAAGCTTCAAAGCAGCAAGTAGCATCATCTGTATCAGACCCTAAAAGTGCCCAACTTGAAATATCAGAGGTTTCTCATGCTGATAAGAAATATCAACCGTCTTCCTTGGGAATTGACAAACCGGCAGATGATGGCTATAATTGGAGGAAGTATGGGCAGAAGCAGGTTAAGGGGAGCGAGTATCCACGGAGCTACTACAAGTGTACACATTTGAATTGCCTGGTAAAAAAAAAGGTTGAGCGCGCCCTTGATGGCCACATAACTGAAATTATCTATAAAGGCCAGCACAACCATGAAATGCCTCAGTCAACTAGGCGTATTAAAGATAACTGTGAATCAAATGAAAATAAAAGCATTCAAGCTAAGTCTGAGTCAAACACACAAGGTTTGGTGGGAAACTCAAACATGATTGATGAAAACATGCCTGATCATTCAGTGCCCGAGATTGACCAGACCTCCAATCAAGGGATTCCTAGACAGTTATCTGGATCCAGTGAGAGTGAGGAAGCGGTTGATGCAAATATTACAGAAGAAGATGGAGATGGTGAGCCAAACCCAAAAAGAAGGAACACTGACGTTGGAGCTTCTGAAGTATCTTTGTCCCATAAGACTGTTACAGAACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTGTTGGATGATGGCTACAGGTGGCGCAAGTATGGCCAAAAAGTAGTTAAGGGAAATCCTCATCCAAGGAGTTACTACAAATGCACCAGTGCAGGATGCAACGTGCGTAAGCATGTTGAGCGAGCCTCAACAGATGCTAAAGCCGTCATAACTACGTACGAGGGAAAACATAACCATGATGTCCCTATTTCTAGAAATAGCAGCCACACCACAGCTCCTACCAATTCAATGCCTTTGAAACCCCAGAAAGTCATGCCTGGGAAGCATCCTTTGCATAGAGACGTGGGGTTTGGAAACAATGACCAAACACCAGCTGTTTTACGCTTAAAGGAAGAGCAAAACGCAGTCCAAGTTTAA	1746	0.4714	MDVCCIAENDRQFARSPNKASESSQFLRQIHTPHKSVLLPSFLPPSMVTKNVQSFTAAAAAAEAPRPTITLPPRPSMEAFFTGGPGASPGPMTLVSSFFSDNYPDSDSRSFSQLLAGAMASPLALGARSGLFADNSTENSSKEGASEDGEKKNLGFKQSRPVNLLISSSPLFTVPSGLSPSGLLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQADFRPFAETTAKPLAVQPSCTTSEASKQQVASSVSDPKSAQLEISEVSHADKKYQPSSLGIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCLVKKKVERALDGHITEIIYKGQHNHEMPQSTRRIKDNCESNENKSIQAKSESNTQGLVGNSNMIDENMPDHSVPEIDQTSNQGIPRQLSGSSESEEAVDANITEEDGDGEPNPKRRNTDVGASEVSLSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDAKAVITTYEGKHNHDVPISRNSSHTTAPTNSMPLKPQKVMPGKHPLHRDVGFGNNDQTPAVLRLKEEQNAVQV	581

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g3814	581	FunFam	WRKY transcription factor 33	452	518	-	-
	Bisa03g3814	581	SUPERFAMILY	WRKY DNA-binding domain	285	345	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3814	581	MobiDBLite	consensus disorder prediction	360	414	-	-
	Bisa03g3814	581	Pfam	WRKY DNA -binding domain	466	522	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3814	581	Pfam	WRKY DNA -binding domain	287	343	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3814	581	Gene3D	WRKY domain	278	346	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3814	581	Gene3D	WRKY domain	450	526	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3814	581	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	186	539	IPR044810	GO:0003700
	Bisa03g3814	581	MobiDBLite	consensus disorder prediction	521	550	-	-
	Bisa03g3814	581	SMART	WRKY_cls	286	344	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3814	581	SMART	WRKY_cls	465	524	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3814	581	MobiDBLite	consensus disorder prediction	527	541	-	-
	Bisa03g3814	581	FunFam	WRKY transcription factor	273	346	-	-
	Bisa03g3814	581	MobiDBLite	consensus disorder prediction	134	154	-	-
	Bisa03g3814	581	MobiDBLite	consensus disorder prediction	356	445	-	-
	Bisa03g3814	581	ProSiteProfiles	WRKY domain profile.	460	525	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3814	581	SUPERFAMILY	WRKY DNA-binding domain	457	525	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3814	581	ProSiteProfiles	WRKY domain profile.	287	345	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g3814	Bisa-ChrBisa03	81478916	81485254	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g3814	66	576	WRKY Transcription Factor Family	AT2G03340	52.552	1.02e-150	442

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa03g3814		WRKY	4.9e-25	CL0274