Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3783 ATGGCGAATTGTTTGATGCTGCTTTCTGAGGTAACAACCAATAACACTTCTCCTTCTTCTTCTTCTTCTTCTTCGTCGTCTCCAACCCTAGGTCGAGTGTTCGAGTGCAAGACCTGTAACCGTCAATTCCCGTCGTTCCAAGCACTCGGGGGCCATCGGGCCAGCCACAAGAAGCCAAGGATGACTATGATAGTCAATACGAGCGAAGAAGCAAAAGATAACAACAACAACAACGATGTACTAATTCTTCATGGTTCATCGTCATCGTTACCATCTAATAAGCCTAGGACTCATGAGTGCTCGATTTGTGGGTTGGAATTTGCAATAGGGCAAGCCTTGGGTGGTCACATGAGGAGGCACAAAGTCTCATTAGCATCAACAAGTAGCAAAAATAACGATAATAATTCAAGTGAGAATTTGAAGATTCATAGTCCTATGAGTACGAGTATGAGCAAAAATAGCATTGAATCCTCAGATTCGGAGGAGGAGGAGAAGAAGAAAAAGAAAGATTATTTGTTGATGGATTTGAACTTGACGCCATGGGAGAATGACTTGGAGATTCTAAGGATAAAGAAGGCCACATTAATGACTCCTTTGGTGGATTGCTTCTATTGA 615 0.4244 MANCLMLLSEVTTNNTSPSSSSSSSSSPTLGRVFECKTCNRQFPSFQALGGHRASHKKPRMTMIVNTSEEAKDNNNNNDVLILHGSSSSLPSNKPRTHECSICGLEFAIGQALGGHMRRHKVSLASTSSKNNDNNSSENLKIHSPMSTSMSKNSIESSDSEEEEKKKKKDYLLMDLNLTPWENDLEILRIKKATLMTPLVDCFY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3783 204 Pfam C2H2-type zinc finger 33 59 - -
Bisa03g3783 204 Pfam C2H2-type zinc finger 98 121 - -
Bisa03g3783 204 SMART c2h2final6 98 120 IPR013087 -
Bisa03g3783 204 SMART c2h2final6 34 56 IPR013087 -
Bisa03g3783 204 MobiDBLite consensus disorder prediction 120 167 - -
Bisa03g3783 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 120 IPR013087 -
Bisa03g3783 204 SUPERFAMILY beta-beta-alpha zinc fingers 32 120 IPR036236 -
Bisa03g3783 204 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Bisa03g3783 204 PANTHER ZINC FINGER PROTEIN ZAT5 1 184 - -
Bisa03g3783 204 MobiDBLite consensus disorder prediction 122 155 - -
Bisa03g3783 204 Gene3D Classic Zinc Finger 32 120 - -
Bisa03g3783 204 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Bisa03g3783 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3783 Bisa-ChrBisa03 80931076 80931690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3783 1 204 C2H2 Transcription Factor Family AT2G28200 36.323 2.50e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g3783 zf-C2H2_6 6.6e-13 CL0361