Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3779 ATGTACTCGTATGATCTCTTTCCGCAGCTTGCCCGTCTGTTTTTGAGGAGCTTTAAGAGCTGTCGGCGAGAGTTCACAATGGCTCCTGCAAAGGTGGACAATACTAAGAAGGCAGATCCGAAAGGACATGCCATGAAGACAGCCAAGGCTTTGAAATCAGGTGGCCCAGTGTTCAAGAAGAAAGCCAAGAAGATGAGGACATCTGTTACATTTCACCGGCCAAAGACATTGAAGAAGGACAGGAACCCCAAGTATCCCCGCATTAGCGCACCACCAAGAAACAAGTTGGATCATTATCAAATTCTTAAATATCCTCTGACTACTGAATCTGCAATGAAGAAGATTGAGGATAACAACACACTTGTTTTTATTGTTGACCTCCGCGCTGACAAGAAGAAAATTAAAGATGCTGTGAAGAAAATGTATGATATTCAGGCCAAAAAAGTGAATACCCTGATCAGGCCTGATGGAACAAAGAAAGCTTATGTTAGGCTAACGCCTGATTATGACGCCCTGGATGTGGCCAACAAAATTGGTATCATTTAA 546 0.4304 MYSYDLFPQLARLFLRSFKSCRREFTMAPAKVDNTKKADPKGHAMKTAKALKSGGPVFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3779 181 FunFam 60S ribosomal protein L23a 61 181 - -
Bisa03g3779 181 ProSitePatterns Ribosomal protein L23 signature. 159 174 IPR001014 GO:0019843
Bisa03g3779 181 NCBIfam 50S ribosomal protein L23 105 181 IPR019985 GO:0003735|GO:0005840|GO:0006412
Bisa03g3779 181 Hamap 50S ribosomal protein L23 [rplW]. 101 181 IPR013025 GO:0003735|GO:0005840|GO:0006412
Bisa03g3779 181 PANTHER 60S RIBOSOMAL PROTEIN L23A 33 181 IPR013025 GO:0003735|GO:0005840|GO:0006412
Bisa03g3779 181 Pfam Ribosomal protein L23 101 163 IPR013025 GO:0003735|GO:0005840|GO:0006412
Bisa03g3779 181 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 98 174 IPR012678 GO:0003735|GO:0005840|GO:0006412
Bisa03g3779 181 Gene3D - 62 181 IPR012677 -
Bisa03g3779 181 Pfam Ribosomal protein L23, N-terminal domain 41 91 IPR005633 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3779 Bisa-ChrBisa03 80852201 80855897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3779 27 181 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 86.452 3.73e-68 202