Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3734 ATGGACAATACGACGACCATCGACTCATCAAACGACGGCGTAAATGGATTCGCATACGGCATCGTTTTAACGATCGGAATCATCTTCCTCATCACCATCTTCCTATTCGCATGTGTCAAGCTTCAAATCCCTGTCCACATACTCTTGAGCATAGGCGCACAACCTCCCACACAAGCGTCCGTACAGCCCTTTGGGGAGCCCACAACCCATGCACAACAACAAGGCATCGATGACGACACGCTTCAAAGTTACCCCAAGGTGTTGTACTCGCAAGTGCGAGACTCGTCGGTTGTCGTCTCTTGCTCCATTTGCTTGGATGATTACAAGGACACCGATGTGTTGAGAAAGCTTCCTGAGTGTGACCACTTATATCATGTTTATTGTATCGACTCATGGCTTAAGTCACATCAGACTTGTCCTTTGTGCCGGACCTCGCCATCACCCGTCCGGCCCAATTCACAGTCCGGTGGGTCCCAAGAGGTGCAGTATGAGGAGGTAACCATTCGTGTTGAATAG 516 0.4981 MDNTTTIDSSNDGVNGFAYGIVLTIGIIFLITIFLFACVKLQIPVHILLSIGAQPPTQASVQPFGEPTTHAQQQGIDDDTLQSYPKVLYSQVRDSSVVVSCSICLDDYKDTDVLRKLPECDHLYHVYCIDSWLKSHQTCPLCRTSPSPVRPNSQSGGSQEVQYEEVTIRVE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3734 171 FunFam E3 ubiquitin-protein ligase ATL6 65 148 - -
Bisa03g3734 171 CDD RING-H2_EL5-like 100 143 - -
Bisa03g3734 171 MobiDBLite consensus disorder prediction 145 162 - -
Bisa03g3734 171 Pfam Ring finger domain 100 143 IPR001841 -
Bisa03g3734 171 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 152 IPR045899 -
Bisa03g3734 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 148 IPR013083 -
Bisa03g3734 171 SMART ring_2 101 142 IPR001841 -
Bisa03g3734 171 SUPERFAMILY RING/U-box 82 150 - -
Bisa03g3734 171 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Bisa03g3734 171 MobiDBLite consensus disorder prediction 145 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3734 Bisa-ChrBisa03 78807282 78807797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3734 12 149 C3H Transcription Factor Family AT2G35910 40.559 8.10e-30 107