Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3725 ATGTTTCAGGACTCCACCGCCGCCGTAACCGCCTCCGCCGGCGCTGCCGCACCGTGGCCGAGTCAGATTCAGTGGACTCGTGAGCAGGACAAGCTCTTCGAGCGGGCCCTGCTGATGGTCCCGGAGGACTGGCCGGACCGGTGGGAGAGGATCGCCGAGAGCGTCCCCGGCGCGTCGGCGATGGAGGTCCGGCAGCGATACGAGGAGCTGGTCCACGATGTGACGGAGATTGACGCGGGTCGGGTCCAGATTCCGTCGTACCCGGAGATCCCGACCGGAAGCGGTTCCTCCAGTTGGGACTCGGCGAATCAGATTTCGTTCAGCTCGAAACCTAAGCACAGTGACACCGAAAGAAAGAAGGGTACGCCTTGGACTGAAGAGGAACACAAACTTTTCCTCATTGGACTTCGCCAATACGGCAAGGGAGATTGGAGGAGCATTTCAAGAAACGTTGTGGTGACAAGAACACCGACTCAAGTAGCCAGCCATGCCCAGAAATACTATCTTCGTCAAACCTCAGGAGGGAAGAAAGAGAGGAAAAGATCAAGCATCCACGACATAACCTCGGTGGACAGCAGCACCATTCCTGTCGATCACAACCAGGTTGCTCCCCCGACTCTCCCAGCTCAGCAGCCCCAGCCGATGCATCAATTCGAATCACAAGATCACTTCATCGATCAGTCGGGCGGGTTTGGGTACCCAAACTATGGCTTCCAAATGTAA 723 0.5712 MFQDSTAAVTASAGAAAPWPSQIQWTREQDKLFERALLMVPEDWPDRWERIAESVPGASAMEVRQRYEELVHDVTEIDAGRVQIPSYPEIPTGSGSSSWDSANQISFSSKPKHSDTERKKGTPWTEEEHKLFLIGLRQYGKGDWRSISRNVVVTRTPTQVASHAQKYYLRQTSGGKKERKRSSIHDITSVDSSTIPVDHNQVAPPTLPAQQPQPMHQFESQDHFIDQSGGFGYPNYGFQM 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3725 240 MobiDBLite consensus disorder prediction 89 110 - -
Bisa03g3725 240 CDD SANT 123 167 IPR001005 -
Bisa03g3725 240 SMART sant 21 73 IPR001005 -
Bisa03g3725 240 SMART sant 120 170 IPR001005 -
Bisa03g3725 240 SUPERFAMILY Homeodomain-like 117 172 IPR009057 -
Bisa03g3725 240 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 24 218 IPR043363 -
Bisa03g3725 240 Pfam Myb-like DNA-binding domain 123 167 IPR001005 -
Bisa03g3725 240 Pfam Myb-like DNA-binding domain 24 68 IPR001005 -
Bisa03g3725 240 ProSiteProfiles SANT domain profile. 119 172 IPR017884 -
Bisa03g3725 240 CDD SANT 25 71 IPR001005 -
Bisa03g3725 240 ProSiteProfiles Myb-like domain profile. 25 71 IPR001005 -
Bisa03g3725 240 FunFam transcription factor MYB1R1 122 173 - -
Bisa03g3725 240 FunFam Transcription factor SRM1 20 84 - -
Bisa03g3725 240 SUPERFAMILY Homeodomain-like 24 78 IPR009057 -
Bisa03g3725 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 172 IPR017930 -
Bisa03g3725 240 Gene3D - 21 84 - -
Bisa03g3725 240 NCBIfam myb-like DNA-binding domain, SHAQKYF class 119 171 IPR006447 GO:0003677
Bisa03g3725 240 Gene3D - 122 173 - -
Bisa03g3725 240 MobiDBLite consensus disorder prediction 82 124 - -
Bisa03g3725 240 ProSiteProfiles Myb-like domain profile. 116 168 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3725 Bisa-ChrBisa03 78450501 78452599 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g3725 Myb_DNA-binding 3.2e-12 CL0123