Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3706 ATGATATCGTATGGCGGGAAATTAAAGACGATTTTGCGAAGTGCGCTTTTCTTGAGTCGCCCAATACCCACTGCTTACTGTAAGCAAATCGCGATGGGCTCTGAAGCTCTTCTTCCAAAATGGGCATCCAAGCCTTGCATCATGGGAATCGACGAAGCTGGCCGAGGACCCGTTTTAGGACCCATGGTGTACGGATGCTTGTACTGTGCTCGCTCGTATCAGAACACCCTTGCGACATTGAGTTTTGCTGATTCTAAGACAATAAAAGAAGAGAAGAGGGAAGAATTATTTGATAATTTAAAGGCAAATGAATCACTTGGATGGGCTGTTGATGTCTTGGACCCAAGGGAGCTCTCAGCAAAAATGCTTAAGAGGACTAAGATAAATCTCAATGAGATATCGCATCAATCTGCCATGGGCCTGATTGATAGGGTACTGAAGATGGGAGTTCTCCTAACTGAGGTTTATATAGATACAGTTGGAGATCCGGAAAAATATCAAACAATGCTATCTAAAAATTTTCCGTCTATCAAATTTGTTGTTGCAAAGAAGGCTGATAGTCTTTATCCTGTTGTTAGTGGTGCAAGCATAGTTGCAAAGGTCACAAGAGATCGAGCTTTGCGGGAATGGGTGCTTGAGGAGACTGCTGAAAACATGCACAGGAACTTTGGCTCTGGATATCCTGGAGATCCCCAAACCAAGTCCTGGCTAGAACAGCACAAACATTCTGTCTTTGGATTTCCAACATTGGTCAGATTCAGTTGGGGAACCTGCAATTCATATTTTAAAGATATTGTTGAAGTCGTATGGGAATCTGATAAAATGGATGAAGATGGTGGAAATGGTAGTAACAGCGGCAAGCGGCAATTGAAATTAAGAAACATAGGTTTCACATCATCCAAGAGGAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGTCGCTGCAAGTTTTTCCAGGCTCGGAAACTTGAACATCTTACTGAATTCTAA 990 0.4232 MISYGGKLKTILRSALFLSRPIPTAYCKQIAMGSEALLPKWASKPCIMGIDEAGRGPVLGPMVYGCLYCARSYQNTLATLSFADSKTIKEEKREELFDNLKANESLGWAVDVLDPRELSAKMLKRTKINLNEISHQSAMGLIDRVLKMGVLLTEVYIDTVGDPEKYQTMLSKNFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWVLEETAENMHRNFGSGYPGDPQTKSWLEQHKHSVFGFPTLVRFSWGTCNSYFKDIVEVVWESDKMDEDGGNGSNSGKRQLKLRNIGFTSSKRRSEEIESSGKGRCKFFQARKLEHLTEF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3706 329 CDD RNase_HII_eukaryota_like 48 267 - -
Bisa03g3706 329 Gene3D Ribonuclease hii. Domain 2 218 264 IPR023160 GO:0004523
Bisa03g3706 329 FunFam Ribonuclease 219 265 - -
Bisa03g3706 329 Pfam Ribonuclease HII 48 258 IPR024567 GO:0004523
Bisa03g3706 329 NCBIfam ribonuclease HII 47 259 IPR004649 GO:0004523|GO:0016070
Bisa03g3706 329 FunFam Ribonuclease 27 217 - -
Bisa03g3706 329 Gene3D - 26 217 IPR036397 GO:0003676
Bisa03g3706 329 PANTHER RIBONUCLEASE H2 SUBUNIT A 36 314 IPR001352 GO:0003723|GO:0004523
Bisa03g3706 329 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 45 267 IPR024567 GO:0004523
Bisa03g3706 329 SUPERFAMILY Ribonuclease H-like 46 263 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3706 32 329 Core DNA Replication Machinery Family AT2G25100 68.456 4.68e-153 429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g3706 03 77764276 77768248 Bisa03g3706 03 77764276 77768248 ECH