Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3656 ATGCAGTCATCCGCTGCAGACGACATTTCCAATGACTACGAAAATGTCAGTTGCAAGCTCGCCGCCGTCATCACCACCGGCACAACTCAGACATCGGCCGAGGACATCTCCGACGACTCTGAAAATCTCAATGGCAAATTCACCACCACTATCACTACCACCGCAATGCAATTATCCGCCGACGACTCCGAGAACCTCAATTGCAAACTCACCGCCTCCAACCCTGCCGGAACAATTCAGAACTCCGCCGACGACGTCTCCGAAAATGTTAATTGTAAACTCGCCGCGTCCATCACAACCAGCTCAATTAGGACATCCGCCGACGACATCTCCTACAACTCCGAAAATCCCAGTTGTAAGCTCACCGCTGCCATCACCACCGGCTCAGTTCAGAAATCCACTGACGACATCTCCGAGGACTCCGAAAATCTCAGTACCGGCACAGTTCAGTCGTCCGCTGGTGAATCCAATACCGCCGGCGCCATTGTTGGAGAGAAGCAGAGTTCACTATCTACCAAACCCTACGCTCCACCATCGGACCTTTTCCGGTGCGCAATCAATCGGATCAAACCAGACGGTTCGAACCGGACGACGTTGGGCATGAGCGACATCCGGTTCGTGCGGCGCGTGGGGAGCGGTGACATAGGGAGTGTGTACGTGGCGGAGGTGAAGGGGTCAGGGTGGGAAGGGCGTGTGTTTGCGGCGAAGGTGATGGACAAGGAGGAGCTGGTGAGTAGGAAGAAGGAAGGGAGGGCGAGGATAGAGAGGGAAATACTAGAAATGTTGGAGCACCCGTTTTTGCCGACTCTTTACGCCGCAATCGAGTCGCCGCGGTGGTGCTGCTTGCTGACGGAGTTCTGCCCCGGGGGCGACCTCCACGTCCTCCGCCAACGGCAACCCCTCCAACGCTTCCACGAAGATGCAGTACGATTCTATGCATCAGAAGTAGTCATTGCGCTGGAGTACCTACACATGATGGGGATAGTTTACCGTGATTTAAAGCCTGAAAATGTGCTCATAAGATCCGACGGTCATATAATGCTCACAGATTTTGATCTCTCGTTGAAATCCCATGATTCCTCCTCATCAACGGCTCAGATTGTATCTGACCACCACCCTCAAAGTCCAACCTACACTGACAAATATGCCACCAATCAATCCTCATCTGCCATGTCATCATGCATCTTACCCAATTGCATAGTGCCAGCTGTCTCCTGCCTCCAGCCCAAACGCAATCGCAAGAAGAAAACATCCACTACTTGTGGGTCACTTGAGATCATAGCAGAGCCAATAGCAATTCGTTCTATGTCATTTGTTGGGACCCATGAATACTTAGCACCGGAAATAATTTCCGGGGAAGGTCACGGCAATGCCGTTGATTGGTGGACACTAGGGATATTTCTGTATGAGTTACTATACGGGATCACACCTTTTAAGGGACTTAACAACGAGTTAACATTGACTAATATAGTGGCTCGAGCCCTTGAGTTTCCTGTAGAGCCTGTGGTTGCTGAACCAACCAAGGACTTGATTGCAAAACTATTGGTCAAAGATCCCACAAAGCGATTGGGGTCCATAATGGGGGCTACGGTCTTAAAGCGCCATCCTTATTTCAATGGAGTTAATTGGGCACTGTTGAGGTGCGCGTCACCACCATATACGCCACCGTCAACTGTGTGCAAGAATTTATTTCAACAACTCCATAATAGCACAACTAATGAAGTAGATTACTATTGA 1737 0.5055 MQSSAADDISNDYENVSCKLAAVITTGTTQTSAEDISDDSENLNGKFTTTITTTAMQLSADDSENLNCKLTASNPAGTIQNSADDVSENVNCKLAASITTSSIRTSADDISYNSENPSCKLTAAITTGSVQKSTDDISEDSENLSTGTVQSSAGESNTAGAIVGEKQSSLSTKPYAPPSDLFRCAINRIKPDGSNRTTLGMSDIRFVRRVGSGDIGSVYVAEVKGSGWEGRVFAAKVMDKEELVSRKKEGRARIEREILEMLEHPFLPTLYAAIESPRWCCLLTEFCPGGDLHVLRQRQPLQRFHEDAVRFYASEVVIALEYLHMMGIVYRDLKPENVLIRSDGHIMLTDFDLSLKSHDSSSSTAQIVSDHHPQSPTYTDKYATNQSSSAMSSCILPNCIVPAVSCLQPKRNRKKKTSTTCGSLEIIAEPIAIRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFLYELLYGITPFKGLNNELTLTNIVARALEFPVEPVVAEPTKDLIAKLLVKDPTKRLGSIMGATVLKRHPYFNGVNWALLRCASPPYTPPSTVCKNLFQQLHNSTTNEVDYY 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3656 578 CDD STKc_phototropin_like 202 556 - -
Bisa03g3656 578 Gene3D Transferase(Phosphotransferase) domain 1 435 556 - -
Bisa03g3656 578 FunFam Serine/threonine-protein kinase OXI1 291 359 - -
Bisa03g3656 578 FunFam serine/threonine-protein kinase D6PK-like 433 556 - -
Bisa03g3656 578 Gene3D Phosphorylase Kinase; domain 1 202 286 - -
Bisa03g3656 578 Gene3D Transferase(Phosphotransferase) domain 1 287 363 - -
Bisa03g3656 578 SUPERFAMILY Protein kinase-like (PK-like) 196 562 IPR011009 -
Bisa03g3656 578 MobiDBLite consensus disorder prediction 130 157 - -
Bisa03g3656 578 Pfam Protein kinase domain 435 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3656 578 Pfam Protein kinase domain 207 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3656 578 SMART serkin_6 204 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3656 578 PANTHER FLIPPASE KINASE 1-RELATED 37 559 - -
Bisa03g3656 578 ProSiteProfiles Protein kinase domain profile. 204 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3656 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3656 Bisa-ChrBisa03 76194834 76198609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3656 206 548 AGC Kinase Gene Family AT3G44610 66.102 1.54e-171 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa03g3656 Pkinase 3e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g3656 03 76194834 76198609 Bisa07g2337 07 53146111 53149722 CCT
Bisa07g2337 07 53146111 53149722 Bisa03g3656 03 76194834 76198609 ECH
Bisa03g3656 03 76194834 76198609 Bisa03g3656 03 76194834 76198609 ECH