Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3633 ATGAAGAAAGTTTGGCTTCTTGTGCTTGTGATTTTCTACTGCGGGATTAATCATTCGAACGGATTCAATGGAATTTTTACAAGACCCAGTTCCGTTAACATTGGGGCAATTCTATCTTATAATTCAACCATTGGCAAAGTGGCAAAAGTTGCAATAGATGCAGCAGTGAACGATATAAACTCCAATCCAACGATTCTCAAAGGGACTAAGCTCAACATTTCAATGAAGGACACAAAATTCTCCACTGGATTTCTAGGCATCATTGATTCATTACTATTGATGGAAAAAGACACAGTAGCCATAATTGGCCCTCAGTACTCTGTTATGGCTCATGTAATTTCACATATAGCCAATGAGCTACAAGTCCCTTTACTATCATTTGCAGCAACAGACCCAACCTTATCTTCTCTTCAATTCCCATATTTTGTGAGGACAACACACAGTGATATGTCTCAGATGGCTGTTATGGCAGATATCGTTAACTACTACAAATGGAGAGATGTGATAGCCATTTACATCGACGATGATCATGGAAGAAATGGGATAGCCACCTTAGGGGACAAGCTAGCTGAGAAGCGTTGCAAGATCTCATATAAAGCACCCCTTAGGCCAAATAACATTGCCAGGGAAGAAATAAACAATGCACTAGTGAAGGTAGCTCTAATGGAGTCAAAGGTCATAGTTCTCCACATATACCCTGACTTGGGTCTAGAAGTACTCAATGTGGCTCATTCTCTAGGCATGATGGTAAATGGGTATGTCTGGTTAGCCACTGATTGGCTTTCCACTATACTAGACACTGACCCAACTGTGTCTTCTTCACATGTCAATGACATCCAAGGTGTTATCACCCTGAGAATGTACACCCCCGAGTCTGAAACCAAAAGAAACTTCAGTTCTAGGTGGAGTAATTTAACAAAGGAGAAAGCTCCTAATCAGGGTCCTTGTGGGTTGAACTCTTATGGCTTACAAGCATATGACACTGTGTGGGTTCTTGCTCATGCACTTGATGGATTCTTCAACAGTGGAGGAAGGTTGTCATTTTCAAACGACTCAAGTCTGAACATGCTAAGAGGGGATAGCTTACATCTAAATAACATAGGCGTATTTACTAACGGTAGTTTATTGTTACAAAACACCAGAGCGGTGAATATGAGTGGTTTAACAGGTTCAATGGAGTTCAGTTCAGATGGTGAACTCATGAATCCTGCATATGAAGTTATTAATGTTATAGGCACAGGGATAAGGAGGATTGGGTATTGGTCAAATTCCTCTAGCCTTTACACTAATCATTCTAACCCCAATTCAAGTAAAGGGCTTTTTGGGGTGATCTGGCCTGGCCAAACCACTAAGACGCCACGAGGCTGGGTTTTTGTTGGGAATGGGAGGCATTTGAAAATAGGGGTGCCTCTTAGAATCAGTTATCGGGAATTTGTGTCCAAAATCGAAGGGTCTGAAATGTTTGGAGGTTACTGCGTGGATGTGTTCACTGCTGCACTCTACTTGTTGCCTTATGCAGTTCCTTACAAGTTTTATCCATTTGGGGATGGTCGAACTAACCCATTAAATTCGGTGCTTCTGAACATGATCACAACTGGTGAGTTTGACGCTGTGGTAGGGGACATTACCATCACCACAGACAGGACAAAGATAGTGGATTTTACGCAGCCATATATCGAGTCTGGGCTAGTTGTGGTGGCCCCAATCAGGAAGCTCAACTCCAGTGCCTGGGCTTTCTTGCGACCATTCACTCCCATGATGTGGTTCGTGACGGGCATGTTCTTCTTTGTTGTGGGAGCAGTTGTCTGGATCTTAGAGCGTCGGGTAAACGATGATTTTAGAGGCCCTCCCCGAAGACAGTTCTTTACCATTATATGGTTTAGCTTCTCAACTCTGTTTTTCGCACATAGAGAGAAAACAGTGAGCACCCTGGGTCGGTTAGTGCTAATCATATGGCTATTTGTGGTTCTAATACTGAACTCCAGCTACATTGCCAGCCTGACTTCAATTCTCACAGTGGAACAGCTGTCTTCCCCTGTGAAGGGAATCGAAAGCTTAATGACAAGACACGAGCTGATTGGTTTTCTTCGGGGTTCCTTTGCTGAGAATTACCTGACTGAGGAGCTCAACATACACAAATCAAGGCTTGTCCCTCTTAACTCTCCTGCGGAATATGAGAAGGCCTTAAGGGATGGGCCTGCCAATGGGGGTGTTGCTGCAATCATTGATGAACGAGCATACATGGAGCTATTCCTAGCAACCAGATGTGAATTCGCGATCGTTGGTCAACAGTTCACCAAAATGGGATGGGGTTTTGCCTTCCAAAGGGACTCTCCCCTAGCAATTGACGTGTCAACAGCGATTTTAAAACTGTCCGAGAATGGGGATCTTCAAAGAATATATGACAAATGGTTATCAAGAAGTGCATGCAACTCAGAAGGCGCAAAGCAAGGCGTAGACCGACTGGAGCTGAAGAGCTTCTGGGGTCTCTTCCTTCTGTGCGGCATAGCGTGCTTCATGGCTCTCCTCTGCTACCTCATTCGAATGGCCTACTCTTTCAGCCGCCACTCCGGTCGCAACATCCGAAGCTTGTCCCGCTCCGCCCGCCTCCGTTCCTTCCTCTCCTTTGTCAATGAAAAGGAAGAGGACGACAAGAACGGCAGGCCCAAGAGAAGGCGCAAGGACAGAGGGTCTGGTAGAAAGGTTGTGCATCAAGATGGGTCACCGGAGTTGGATATTGGCCCCCATGGTAATCTTCATTTTGAAATTGATTCCCACTGCTAA 2784 0.4472 MKKVWLLVLVIFYCGINHSNGFNGIFTRPSSVNIGAILSYNSTIGKVAKVAIDAAVNDINSNPTILKGTKLNISMKDTKFSTGFLGIIDSLLLMEKDTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLSSLQFPYFVRTTHSDMSQMAVMADIVNYYKWRDVIAIYIDDDHGRNGIATLGDKLAEKRCKISYKAPLRPNNIAREEINNALVKVALMESKVIVLHIYPDLGLEVLNVAHSLGMMVNGYVWLATDWLSTILDTDPTVSSSHVNDIQGVITLRMYTPESETKRNFSSRWSNLTKEKAPNQGPCGLNSYGLQAYDTVWVLAHALDGFFNSGGRLSFSNDSSLNMLRGDSLHLNNIGVFTNGSLLLQNTRAVNMSGLTGSMEFSSDGELMNPAYEVINVIGTGIRRIGYWSNSSSLYTNHSNPNSSKGLFGVIWPGQTTKTPRGWVFVGNGRHLKIGVPLRISYREFVSKIEGSEMFGGYCVDVFTAALYLLPYAVPYKFYPFGDGRTNPLNSVLLNMITTGEFDAVVGDITITTDRTKIVDFTQPYIESGLVVVAPIRKLNSSAWAFLRPFTPMMWFVTGMFFFVVGAVVWILERRVNDDFRGPPRRQFFTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLMTRHELIGFLRGSFAENYLTEELNIHKSRLVPLNSPAEYEKALRDGPANGGVAAIIDERAYMELFLATRCEFAIVGQQFTKMGWGFAFQRDSPLAIDVSTAILKLSENGDLQRIYDKWLSRSACNSEGAKQGVDRLELKSFWGLFLLCGIACFMALLCYLIRMAYSFSRHSGRNIRSLSRSARLRSFLSFVNEKEEDDKNGRPKRRRKDRGSGRKVVHQDGSPELDIGPHGNLHFEIDSHC 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3633 927 Pfam Ligand-gated ion channel 807 838 IPR001320 GO:0015276|GO:0016020
Bisa03g3633 927 Gene3D - 457 575 - -
Bisa03g3633 927 FunFam Glutamate receptor 576 706 - -
Bisa03g3633 927 SMART GluR_14 466 807 IPR001320 GO:0015276|GO:0016020
Bisa03g3633 927 Gene3D - 729 812 - -
Bisa03g3633 927 Gene3D - 576 710 - -
Bisa03g3633 927 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 878 IPR015683 -
Bisa03g3633 927 SUPERFAMILY Periplasmic binding protein-like II 440 807 - -
Bisa03g3633 927 Gene3D - 148 426 - -
Bisa03g3633 927 CDD PBP1_GABAb_receptor_plant 33 427 IPR044440 -
Bisa03g3633 927 PIRSF IGluLR_plant 1 911 IPR017103 -
Bisa03g3633 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Bisa03g3633 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 325 337 - -
Bisa03g3633 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Bisa03g3633 927 CDD GluR_Plant 465 805 - -
Bisa03g3633 927 FunFam Glutamate receptor 148 308 - -
Bisa03g3633 927 Pfam Receptor family ligand binding region 50 412 IPR001828 -
Bisa03g3633 927 FunFam Glutamate receptor 460 576 - -
Bisa03g3633 927 FunFam Glutamate receptor 702 809 - -
Bisa03g3633 927 SUPERFAMILY Periplasmic binding protein-like I 28 456 IPR028082 -
Bisa03g3633 927 MobiDBLite consensus disorder prediction 881 916 - -
Bisa03g3633 927 Gene3D - 50 402 - -
Bisa03g3633 927 Pfam Bacterial extracellular solute-binding proteins, family 3 526 806 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3633 Bisa-ChrBisa03 75352690 75358760 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3633 5 894 Ion Channels AT3G51480 58.602 0.0 1067