Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3631 ATGCTTATTTTTCTTCTTCTTCAGATCGTACAACACAGCATGAAGAAAGTTTGGCTTCTTGTGCTTGTGATTTTCTACTGCCGGATTAATCGTTCGAACGGATTCAACGGGATTTCTACAAGACCCAGTTCCGTTAACATTGGAGCAATTCTATCTTATAATTCAATCATTGGCAAAGTGGCAAAAGTTGCAATATATGCAGCAGTGGACGATATAAACTCCAATCCAACGATTCTCAAAGGGACTATGCTCAACATTTCAATGAAGGACACAAAATTCTCAACCGGATTTCTAGGCATCATTGATTCATTACTATTGATGGAAAAAGACACAGTAGCCATAATTGGCCCTCAGTACTCTGTTATGGCTCATGTAATTTCGCATATAGCCAATGAGCTACAAGTCCCTTTACTATCGTTTGCAGCAACAGACCCAACCTTATCTTCTCTTCAGTTCCCATATTTTGTGAGGACAACACACAGTGATATGTCTCAGATGGCTGTTATGGCAGATATCGTTAACTACTACAAATGGAGAGATGTGATAGCCATTTACATCAACGATGATCATGGAAGAAACGGGATAGCCACCTTAGAGGACAAGCTAGCTGAGAAGCGTTGCAAGATCTCATATAAAGCACCCCTTAAGCCAAATAACATAGCTAGGGAAGAAATAAACAATGCACTAGTGAAGGTAGCTTTAATGGAGTCAAAGGTCATAATTCTCCACATATACCCTGACTTGGGTCTAGAAGTACTCAATGTGGCTCATTCTCTAGGCATGATGGTAAATGGGTATGTCTGGTTAGCCACTGATTGGCTTTCCACTATGCTGGACACTGACCCAACTATGTCTTCTTCACATGTCAATGACATCCAAGGTGTTATCACCTTGAGAATGTACACCCCCGAGTCTGAAACCAAAAGAAACTTCAGTTCTAGGTGGAGTAATTTAACAAAGGAGAAAGCTCCTAATCAGGGTCCTTGTGGGTTGAAGTCTTATGGATTACATGCATATGACACTGTGTGGGTTCTTGCTCATGCACTTGATGGATTCTTCAACAGTGGAGGAAGGTTGTCATTTTCAAACGACTCAAGTCTGAACATGTTAAGAGGGGATTGCTTACATCTAAATAACATAGGCGTATTTACTAATGGTAGTTTATTGTTACAAAAAACCAGAGCAGTGAATATGAGTGGTTTAACAGGTTCAATGGAGTTTAATTCAGATGGTGAACTCATGAATCCTGTATATGAAGTTATTAATGTTATAGGCACAGGGATAAGGAGGATTGGGTATTGGTCAAATTCCTCTAGCCTTTACACTAATCATTCTAACCCCAATTCAAGTAAAGGGCTTTTTGGGGTGATCTGGCCTGGCCAAACCACTAAGACTCCACGAGGCTGGGTTTTTGCTGGGAATGGGAGGCATTTGAAAATAGGGGTGCCTCTTAGTATCAGTTTTCGGGAATTTGTGTCCAAAATCGAAGGGTCTGAAATGTTTGAAGGTTACTGCGTGGATGTGTTCACTGCTGCACTCGACTTGTTGCCTTATGCAGTTCCTTACAAGTTTTATCCATTTGGGGATGGTCGAACTAACCCATTAAGTTCGGTGCTTCTGCACATGATCACAACTGGTGAGTTTGACGCTGTGGTAGGGGACATTACCATCACCACAGACAGGACAAAGATTGTGGATTTTACGCAGCCATATATTGAGTCTGGGCTAGTTGTTGTGGCCCCTATCAGGAAGCTCAACTCTAGTGCCTGGGCTTTCTTGCGACCATTCACTCCCATGATTTGGTTCGTGACGGGTATGTTCTTCTTTGTTGTGGGTGCAGTTGTGTGGATCTTAGAGCGTCGGGTAAACGATGATTTTAGAGGCCCTCCCCGAAGACAGTTCTTTACCATTATATGGTGA 1920 0.4203 MLIFLLLQIVQHSMKKVWLLVLVIFYCRINRSNGFNGISTRPSSVNIGAILSYNSIIGKVAKVAIYAAVDDINSNPTILKGTMLNISMKDTKFSTGFLGIIDSLLLMEKDTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLSSLQFPYFVRTTHSDMSQMAVMADIVNYYKWRDVIAIYINDDHGRNGIATLEDKLAEKRCKISYKAPLKPNNIAREEINNALVKVALMESKVIILHIYPDLGLEVLNVAHSLGMMVNGYVWLATDWLSTMLDTDPTMSSSHVNDIQGVITLRMYTPESETKRNFSSRWSNLTKEKAPNQGPCGLKSYGLHAYDTVWVLAHALDGFFNSGGRLSFSNDSSLNMLRGDCLHLNNIGVFTNGSLLLQKTRAVNMSGLTGSMEFNSDGELMNPVYEVINVIGTGIRRIGYWSNSSSLYTNHSNPNSSKGLFGVIWPGQTTKTPRGWVFAGNGRHLKIGVPLSISFREFVSKIEGSEMFEGYCVDVFTAALDLLPYAVPYKFYPFGDGRTNPLSSVLLHMITTGEFDAVVGDITITTDRTKIVDFTQPYIESGLVVVAPIRKLNSSAWAFLRPFTPMIWFVTGMFFFVVGAVVWILERRVNDDFRGPPRRQFFTIIW 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3631 639 Gene3D - 63 415 - -
Bisa03g3631 639 SMART GluR_14 479 639 IPR001320 GO:0015276|GO:0016020
Bisa03g3631 639 SUPERFAMILY Periplasmic binding protein-like II 453 606 - -
Bisa03g3631 639 Pfam Bacterial extracellular solute-binding proteins, family 3 537 581 IPR001638 -
Bisa03g3631 639 Gene3D - 474 588 - -
Bisa03g3631 639 SUPERFAMILY Periplasmic binding protein-like I 41 469 IPR028082 -
Bisa03g3631 639 FunFam Glutamate receptor 473 589 - -
Bisa03g3631 639 CDD PBP1_GABAb_receptor_plant 46 440 IPR044440 -
Bisa03g3631 639 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 45 639 IPR015683 -
Bisa03g3631 639 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 338 350 - -
Bisa03g3631 639 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 58 74 - -
Bisa03g3631 639 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 119 147 - -
Bisa03g3631 639 Gene3D - 161 439 - -
Bisa03g3631 639 Gene3D - 589 638 - -
Bisa03g3631 639 FunFam Glutamate receptor 161 321 - -
Bisa03g3631 639 Pfam Receptor family ligand binding region 63 425 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3631 Bisa-ChrBisa03 75151213 75154630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3631 14 639 Ion Channels AT1G42540 52.969 0.0 694