Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3615 ATGATATCTTCCGGGGTCAACTTGGTGATGACTGTGATTGGATTCGCGGTGAGCACTATGTTCATCGTTTTCGTTTGCACTAGACTTATCTGTGCTCGAATTCACTTGAATGCTTCCCGCCGATCCTTCGTTATTGCTTCCAGATCCGATCTCAGCCTGCTAGAACGGGGTTTTCATGGTGCTGAACCCATAGCAGTAGCCAACTTTCCGACTAAGAAGTACAGCGATGAATTTTTTTCGGCTGCTGAAAATTCTCAATGCACTGTGTGTCTTTCGGAGTACCAAGGCGAAGACATACTGCGCATCCTCCCCCACTGCGGCCACTTCTTCCACGTCCTCTGCATAGACCTTTGGCTGCAGCAGCATTCCACGTGTCCTATTTGTCGAATATCACTACGTGAACAGTCCGAGAGAAAGCGCATAATGCAACCCTTGTTCAGCTCTGCGATTCGATCAAACTCTGGCGTGGAAGCTGTTGACACTCATCCCTATCATTTTATGATGGCTAATGATGGATTATCATCAAGAAACCCTAACATACATGGTGTGAACCCTGCACAAGAGGATCATTTAACATCTGAGGGTGGTGGAGCAGTTGCAGTAGAGAATGTCACCCGTATGAGTCATGGTGATCAGACCATGAAAGATGCAGGAAACAAGCATGTAGAAAGCCCATCAATTCACTTAAGCTAA 693 0.4661 MISSGVNLVMTVIGFAVSTMFIVFVCTRLICARIHLNASRRSFVIASRSDLSLLERGFHGAEPIAVANFPTKKYSDEFFSAAENSQCTVCLSEYQGEDILRILPHCGHFFHVLCIDLWLQQHSTCPICRISLREQSERKRIMQPLFSSAIRSNSGVEAVDTHPYHFMMANDGLSSRNPNIHGVNPAQEDHLTSEGGGAVAVENVTRMSHGDQTMKDAGNKHVESPSIHLS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3615 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 135 IPR013083 -
Bisa03g3615 230 CDD RING-H2_EL5-like 86 129 - -
Bisa03g3615 230 SUPERFAMILY RING/U-box 80 135 - -
Bisa03g3615 230 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Bisa03g3615 230 SMART ring_2 87 128 IPR001841 -
Bisa03g3615 230 MobiDBLite consensus disorder prediction 209 230 - -
Bisa03g3615 230 PANTHER OS11G0150450 PROTEIN 1 187 - -
Bisa03g3615 230 Pfam Ring finger domain 86 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3615 Bisa-ChrBisa03 74145187 74148311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3615 69 132 C3H Transcription Factor Family AT4G10150 51.562 2.92e-19 81.6