Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3612 ATGCATGGTGCTCAATCTGACAGCAGCAACAATAGGTTTCAGAGAGCTGTTCCGGCAAGGGAAGCATCGGCTCTGGCAACCGGATTGGGGGGCAATTTGCAACCCACGAATGTGGTTGATGAGTTTGGCCACTGGAGGGGACAAGCTTCGTTCAAAAGTTGGGCGAAGCAAACTGAGGAGAGCTACCAGTTGCAGCAGGCTCTGGCGCTTCGTCTTTCGTCGCAGGCAGCTTGTGCGGATGATCCTAATTTCTTAGACTTGCAGTCCAACACCTCCTCCAATTCGGCTGAGGCAGTGTCGCATCGATTCTGGGTCAATGGTTGTTTGCAATACTCGGACAAAATTCCACAAGGATTTTATCTTATCCATGGGATGGATGCATATTCATGGACTATAAGTACTGATCTGCAGAATGCTGGTCTGATTCCATCATTTGAATCACTGATGTCAGTTGAACCTAGTGATGATTTGTCAGTTGTAGTGGTTGCTATTGATAAATCGAGAGATCCTTGTTTGAGAGAACTACTAGGTGGTGTGGTTAGTCTTACTGGTAACTGGATTACTCCAAAGGATGTAATTGATCATCTTGCAAATCTTGTTTGCAGTAGGTTGGGGGGTGAAGTTTGGACTGAAGAAAACTTGGTTCCACACTGGAAGGAATGCACTCAAATTTTGAAAGGCGTTCGACGCTCTGTCATCCTTCCAATAGGAAGTTTAAGTGTTGGCCTTTGTGTCCATCGGGCATTGCTCTTTAAAGTGTTAGCTGACTCAATTAACCTCCCATGCCGAATTGCCAAGGGCTGCAAGTATTGTAAAAAGAATGTAGGTGCCTCATGTTTGGTGCAAATTGGTCCTGACAGGGAGTATTTGATTGATTTGGTTGGAAGGCCAGGGGAAATGAGCCAGCCTGATTCGTCACTGAATTCTGCATCTTCAGTATTAATTGCTTCACCACTATGTCATCCAAAGTTCAAGCCAGTTGAAACAACTGAATATTCAAAGACATTAGCCCAATTATATTTCTTGGACTCTCAACGACTGCATCTTGTATTTGATACCAAGTCAGGTGGTGCTGTTGATCACAATGATGGAAAGGGTCCAAAGCCAACTGAACCTTTTAATGCAATCTATGCAGAAGAGTATGCATTATCCAAAGAAGCAAATCCACCGGTATTGGATAGACCAAGTCATGGAGTTGATCCTCATGATGATGATCTGGACATCCTGTGGAGTGAACTTATTTTGAAAGAGAAAATTGGAACAGGTTCATTTGGAACTGTCCTCCGTGCAGATTGGCGTGGTTGTGATGTTGCCGTGAAAATTCTTAAGGTGCAAGGTTTTGATGCTAAACGATATGAAGAATTTAGGAAAGAGGTCTCACTCATGAAACGTCTACGGCATCCAAACATTGTCCTTTTAATGGGTGCAGTTTTTCAACAACCCAACTTGTCCATAGTGACAGAATATTTATCAAGAGGAAGCTTGCTTGAACTTTTGCGCATGCCAGATGCTGGATTAGTTCTCAGTGCAAAGCGTCGGTTAAGTATGGCCTATGATGTGGCAAGTGGAATGAATTATCTTCAACAGATGAAACCTCCCATTGTTCATAGAGATCTGAAGTCTCCAAATCTTTTGGTGGATGATACTTATACGGTGAAGGTATCCGATTTTGGTCTTTCCCGTAGCAAGGCAAACACATTTCTTTCATCTAAAACAGCTGCTGGGACTCCTGAGTGGATGGCACCAGAAGTCATCCGTGGTGAACCATCTAATGAAAAATGCGACGTATTCAGCTTTGGTGTAATCTTGTGGGAACTTGTGACTTTGCAGCAGCCTTGGAGAAATTTAAATCCTTCGCAGGTTGTCGCAGCTGTAGGTTTTATGGACAAAAGGCTGGAGATTCCAAGCTATGCAAATCCTCAGGTGGCCGCCTTGATTGAGCTTTGCTGGGCCGTTGAACCCTGGAAACGTCCTTCTTTCTCCTACATTATGAACTGCTTACAGCAAATGATTATGGACTCCTGA 2025 0.4395 MHGAQSDSSNNRFQRAVPAREASALATGLGGNLQPTNVVDEFGHWRGQASFKSWAKQTEESYQLQQALALRLSSQAACADDPNFLDLQSNTSSNSAEAVSHRFWVNGCLQYSDKIPQGFYLIHGMDAYSWTISTDLQNAGLIPSFESLMSVEPSDDLSVVVVAIDKSRDPCLRELLGGVVSLTGNWITPKDVIDHLANLVCSRLGGEVWTEENLVPHWKECTQILKGVRRSVILPIGSLSVGLCVHRALLFKVLADSINLPCRIAKGCKYCKKNVGASCLVQIGPDREYLIDLVGRPGEMSQPDSSLNSASSVLIASPLCHPKFKPVETTEYSKTLAQLYFLDSQRLHLVFDTKSGGAVDHNDGKGPKPTEPFNAIYAEEYALSKEANPPVLDRPSHGVDPHDDDLDILWSELILKEKIGTGSFGTVLRADWRGCDVAVKILKVQGFDAKRYEEFRKEVSLMKRLRHPNIVLLMGAVFQQPNLSIVTEYLSRGSLLELLRMPDAGLVLSAKRRLSMAYDVASGMNYLQQMKPPIVHRDLKSPNLLVDDTYTVKVSDFGLSRSKANTFLSSKTAAGTPEWMAPEVIRGEPSNEKCDVFSFGVILWELVTLQQPWRNLNPSQVVAAVGFMDKRLEIPSYANPQVAALIELCWAVEPWKRPSFSYIMNCLQQMIMDS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3612 674 FunFam PAS domain-containing protein tyrosine kinase family protein 491 674 - -
Bisa03g3612 674 Pfam Protein tyrosine and serine/threonine kinase 414 667 IPR001245 GO:0004672|GO:0006468
Bisa03g3612 674 CDD STKc_MAP3K-like 419 665 - -
Bisa03g3612 674 Gene3D Phosphorylase Kinase; domain 1 406 491 - -
Bisa03g3612 674 SUPERFAMILY Protein kinase-like (PK-like) 402 667 IPR011009 -
Bisa03g3612 674 ProSitePatterns Protein kinases ATP-binding region signature. 419 440 IPR017441 GO:0005524
Bisa03g3612 674 ProSiteProfiles Protein kinase domain profile. 413 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3612 674 Gene3D Transferase(Phosphotransferase) domain 1 492 674 - -
Bisa03g3612 674 SMART serkin_6 413 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3612 674 Pfam Ethylene-responsive protein kinase Le-CTR1 96 300 - -
Bisa03g3612 674 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 87 669 - -
Bisa03g3612 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Bisa03g3612 674 PRINTS Tyrosine kinase catalytic domain signature 528 546 IPR001245 GO:0004672|GO:0006468
Bisa03g3612 674 PRINTS Tyrosine kinase catalytic domain signature 487 500 IPR001245 GO:0004672|GO:0006468
Bisa03g3612 674 PRINTS Tyrosine kinase catalytic domain signature 638 660 IPR001245 GO:0004672|GO:0006468
Bisa03g3612 674 PRINTS Tyrosine kinase catalytic domain signature 594 616 IPR001245 GO:0004672|GO:0006468
Bisa03g3612 674 PRINTS Tyrosine kinase catalytic domain signature 575 585 IPR001245 GO:0004672|GO:0006468
Bisa03g3612 674 FunFam Serine/threonine-protein kinase isoform 1 403 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3612 Bisa-ChrBisa03 74093939 74102592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3612 54 671 MAP Kinase Kinase Kinase AT5G03730 59.816 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bisa03g3612 PK_Tyr_Ser-Thr 3e-67 CL0016