Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3571 ATGGTTTTTCTGTCGCGATTTTGCTTGTTACCTTACCGCAATGGTTGGATTTGCATACTATTTGATAGGCATAATGCGAGGCAGCGGATACTGCAGCTGGTGAAGGATACTTCGGCTAAGCTCAAGGCGTTGAGTGAATCTGATCGTGTTACCGATACTGATTTTTCGGTGTTGAAATTGCCTTTGGCTCTTTTGCCTAGTAAGAAAATTGAAGATGCTAAGCTAGCGAGAGATTTCCAAACCACATTGCAAGAGTTCCAGAGAGTCCAACAGCTTGCTTCTCAGCGCGAGTCTACTTACCTTCCTGCTGCCCCTTCTTCTTTACCAACAAGCTCTGGCTCTGGTGAAGAATCCGTTGACATAGATCAGGAAAGCCAACCTTTTGTCAGGGAACAGAAGAGGATACTCCTCTTGGATAACGAAATTGCGTTCAATGAGGCCATGATTGAAGAAAGAGAACAGGGCATTAGAGAGGTAGAGGAGCAAATTGGACAAGCAAATGAAATATTCAAGGACCTAGCTGTTCTTGTTCATGAGCAGGGGGTGGTTATTGATGATATTCAATCAAATATTGATACTTCTGCTAGTGCAACCACCCAAGCTAAAGTACAGCTAGCCAAGGCTTCCAAAAGTGTGAAATCTAGATCTTCATGTGTAAGTTGTGTAGACTTTGATACTGATAAGCTCTAA 690 0.4304 MVFLSRFCLLPYRNGWICILFDRHNARQRILQLVKDTSAKLKALSESDRVTDTDFSVLKLPLALLPSKKIEDAKLARDFQTTLQEFQRVQQLASQRESTYLPAAPSSLPTSSGSGEESVDIDQESQPFVREQKRILLLDNEIAFNEAMIEEREQGIREVEEQIGQANEIFKDLAVLVHEQGVVIDDIQSNIDTSASATTQAKVQLAKASKSVKSRSSCVSCVDFDTDKL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3571 229 Pfam Syntaxin-like protein 24 100 IPR006011 GO:0016020
Bisa03g3571 229 Coils Coil 149 169 - -
Bisa03g3571 229 CDD SNARE_Qa 149 207 - -
Bisa03g3571 229 Gene3D - 22 106 - -
Bisa03g3571 229 Gene3D - 147 210 - -
Bisa03g3571 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 146 208 IPR000727 -
Bisa03g3571 229 Pfam SNARE domain 183 220 IPR000727 -
Bisa03g3571 229 SMART tSNARE_6 141 208 IPR000727 -
Bisa03g3571 229 MobiDBLite consensus disorder prediction 100 121 - -
Bisa03g3571 229 PANTHER SYNTAXIN 24 219 IPR045242 -
Bisa03g3571 229 MobiDBLite consensus disorder prediction 100 125 - -
Bisa03g3571 229 SUPERFAMILY t-snare proteins 24 201 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3571 Bisa-ChrBisa03 72666328 72667635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3571 24 224 SNARE and Associated Proteins AT5G46860 55.825 7.87e-65 200