Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3561 ATGCCTTCTCGGCAACCCTCCATATCTCCGCCGTCTGCGGTTGTTATCGACCTCTATCCGCCTGCTCCTCCTCCAAATCAATCCCGTTTGCCTCATTTTGTTGCTTCCACCACCTCTCTGTGCTCCCTCCTCCTTCTCGTCCTCCTCTGTTTTCGCAGGAAGCGAACCACCCCTTCTTCCGATTCCGAGTCCAAGCCTCCTTACCGCTTCTCGTACCCCCTTCTCCGCCGTGCCACGTCATCCTTCTCCACCCTCCTCGGCCATGGCGGCTTCGGCCCCGTATTCTCCGGCACTCTGCCTTCGACCCGACAACCCATCGCCGTCAAGCTCATGGACTCTGCATCTCTCCAGGGCGAGCGCGAGTTCCACAACGAGCTTTTCTTCGCTTCCAGGCTTCGTTCCCAATACGTTGTCTCCGCCATGGGATTTTCCTCCGACAGAAAGCGCCGGCGATTCCTGCTCGTATACGAGTTGATGCACACCGGAAATCTCCAAGATGCGCTCTTGCACCGTAAGTGCCCCGAGCTGTTGGATTGGAAGAAGCGGTTTTCTGTTATCGTTGACATAGCCAAAGGGATTCAGTACCTTCACTCTTGCGACCCACCTGTGATTCATGGCGATATCAAGCCCAGTAACATTCTGTTGGACCGTAATTTATCGGCGAAGATCGGGGATTTGGGGCTTGCTCGGTTGAAATCGGAATCCCATTATGAAATAGGAATTTTGGGCGTTGACGGTGTTGAAAAGAACAATGATGGATTAGAGATGGAGGAGAATAAGAGAAAGGAGGAAGAGTTAGAGAGTAGTAGTGGTTCTCTGCTTGAGGAAACACAGAGCGTGACTACTGCTGAGCAATCACCAGAAGGTTCTGTCAAAATACCCATATCAGAAACATCGCCGGAGACGATTGAGGCGACGCCGGCATCGCCTATGGAGGCAAATTTTGATAAGGTTAGCATTCAGAGTGAGAAAGACATAAGCAGGGGTGCTAAGAAAAACGGGAAATGGTTGAAGAGCAATTCCGTGAAGGATTGGTGGTGGAAGCACGATAATGAGGCAGCAATAGCGTCATCCCCAATGGGTGAGAATAAGAAAGTGAAGGACTACGTGATGGAGTGGCTGGGCAAGGAGATAAACAAGGAAACACCAAAAAGCGAATGGGTAGCAAAAGCAGATACCTCGATGGAAAAGGCAGAGAAAAAGAGGAGCAAGAGGCGATTGGAGTGGTGGGCATCAATGGACGAGGAAAACAATGGTAAAGCGTCGAAGAAGAAAAGGCCAGCGAGGGAATGGTGGAAGGAGGAGTATTGTAAAGAGCTCGAGAAGAAAAAGAAGAAGAAACAACATCGGCAGAAGAGAAACGGAGAAAACAGTAGGATTAGGAATATAGATTGGTGGTTAGATGGGATTAGCGGTGAGCCATTCAGAGCTCGCAGAAATAGCTATGATTCTGGAAGCGGAGAAATTCCAAAGAGTGGGGCTATCAGTATCAGTAGTACACCAAGCATGAGGGGAACAGTCTGTTATGTTGCTCCTGAGTATGGTCATGGCCAAGATGTATCAGAGAAGTGCGATGTGTATAGTTTTGGGGTTCTGTTGCTTGTTATCGTTTCTGGGCGACGCCCACTTCAGGTGACTGGTTCACCATTGTCGGAGTTTCACAGAGCGAATCTATTGTCTTGGGCACGCCGTTGTGCACGCAATGGGAAGTTGCTTGATCTGGTTGATCACTCTATTAAGTCACTGGACAAAGAGCAGGCTCTTCTCTGCATCCACATTGCTCTGCTCTGTCTGCTGAAAACACCTTCTCGTCGACCTTCAATGAAAGAAGTTGTGGCAATGCTTAGTGGTGAATTGGAGCCACCACAACTGCCGGTTGAGTATTCACCGTCGCCGCCGTCTCGCGTCCTATTCAAATCTCGGTGA 1926 0.4995 MPSRQPSISPPSAVVIDLYPPAPPPNQSRLPHFVASTTSLCSLLLLVLLCFRRKRTTPSSDSESKPPYRFSYPLLRRATSSFSTLLGHGGFGPVFSGTLPSTRQPIAVKLMDSASLQGEREFHNELFFASRLRSQYVVSAMGFSSDRKRRRFLLVYELMHTGNLQDALLHRKCPELLDWKKRFSVIVDIAKGIQYLHSCDPPVIHGDIKPSNILLDRNLSAKIGDLGLARLKSESHYEIGILGVDGVEKNNDGLEMEENKRKEEELESSSGSLLEETQSVTTAEQSPEGSVKIPISETSPETIEATPASPMEANFDKVSIQSEKDISRGAKKNGKWLKSNSVKDWWWKHDNEAAIASSPMGENKKVKDYVMEWLGKEINKETPKSEWVAKADTSMEKAEKKRSKRRLEWWASMDEENNGKASKKKRPAREWWKEEYCKELEKKKKKKQHRQKRNGENSRIRNIDWWLDGISGEPFRARRNSYDSGSGEIPKSGAISISSTPSMRGTVCYVAPEYGHGQDVSEKCDVYSFGVLLLVIVSGRRPLQVTGSPLSEFHRANLLSWARRCARNGKLLDLVDHSIKSLDKEQALLCIHIALLCLLKTPSRRPSMKEVVAMLSGELEPPQLPVEYSPSPPSRVLFKSR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3561 641 Pfam Protein kinase domain 500 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3561 641 SMART serkin_6 80 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3561 641 MobiDBLite consensus disorder prediction 621 641 - -
Bisa03g3561 641 ProSiteProfiles Protein kinase domain profile. 80 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g3561 641 MobiDBLite consensus disorder prediction 255 306 - -
Bisa03g3561 641 Gene3D Transferase(Phosphotransferase) domain 1 65 245 - -
Bisa03g3561 641 MobiDBLite consensus disorder prediction 271 305 - -
Bisa03g3561 641 Pfam Protein tyrosine and serine/threonine kinase 83 236 IPR001245 GO:0004672|GO:0006468
Bisa03g3561 641 Gene3D Transferase(Phosphotransferase) domain 1 483 622 - -
Bisa03g3561 641 MobiDBLite consensus disorder prediction 255 269 - -
Bisa03g3561 641 FunFam Os07g0541700 protein 159 240 - -
Bisa03g3561 641 SUPERFAMILY Protein kinase-like (PK-like) 57 634 IPR011009 -
Bisa03g3561 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Bisa03g3561 641 PANTHER OS07G0586332 PROTEIN 1 454 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3561 Bisa-ChrBisa03 72480815 72482740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3561 505 615 Receptor kinase-like Gene Family AT3G58690 33.621 2.40e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Bisa03g3561 PK_Tyr_Ser-Thr 5.2e-26 CL0016