Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3544 ATGGGCTTTCTCCGGAGAGTCTTCGGCCGCAAAAAACCCGATAATTCGTCGGCACCCTCTTCCGGGTCGGATCATAAACCGGACAATCATAAGAGGACATGGAGCTTCGGCAAACCCACCAAGCGCAAGTCTCCCGGTAGTAGGCTATCTGGTCTCCACGACTTTGACTCTTCCACTCCATCCTCCGACTCTTTGGATGCTAATAAGCATGCTATAGCTGTAGCGGCGGCTACGGCCGCCGTGGCGGAGGCGGCACTGGCCGCTGCCCATGCCGCAGCAGAGGTTGTAAGACTAACAAGTGGTGGCACCGGCACTGGCGCCGGTGCTGCTGGTACCATCACTCGACCCGTGAATGCGACACATATAAACTCGAATCAACGCCGGTGGGTGGAAGAAGTCGCCGCCGTTAAAATACAGTCAGCTTTCCGCGCTTATCTGGCGAGGAGAGCTCTGCGAGCACTTAAAGCATTGGTGAAGTTGCAGGCCTTGGTGAGGGGTTACATAGTAAGAAAGCAAACCGCAGAGATGCTCAGGCGCATGAAAACATTGGTTCGACTACAGGCTAAGGCACGTGCAAGTCGTGTGCCCTTGTCAGATAGTCTGCATTCTAGCAAGTCTTCACTATTTTATCATCCTGTCCCTGAAGATCATGAGCGCCTACTTCATTCCTATAGTACAAAATTTGAAGGATCCTCCATCTTGAAGAGATGTAGCTCCAATGCAAATTTTAGGGATATTGACCCAGAAAAAGCGGGTTTTGGGACGCATTGGTTGGATCGTTGGATGGAAGAAAGTGTTTGGATACACCCAAGAGATGCCTCACTGAGAAATGGGCAGACTGATGATGAGAAGAGCGACAAGATTCTTGAAGTAGACACGTGGAAGCCACACCTGAGCTCTCACCGCAGAAGCAGCTCCTTCCACGCATCTCAATACTATGTAGCTTCTGATTACAACAATGAGATGGCATATGAATCTCCATCCAAAAGGTCCGCGAAAGCTCTAAACCAAAGCCTCTCCCCTAGGGGGGGTTTATCACTGAGCTCTCTCAAGTGTCACAAAGGAAAAGAATTATTGGCTTCGCGAACTGCTGAGAATAGCCCACAAACACTTTATGCCTCATCTAGACCTGGAAGTGGTGGTAGGAGTAGGAGAGGTCCTTTCACACCCGCAAGGAGTGAGTGTTCTTGGGGCTTCTTTGGTGGGTTCCCAGGTCACCCCAGTTACATGGCAAACACTGAATCTTCACGTGCTAAGGTTCGATCACAGAGTGCTCCGAGGCAAAGGTTGGAGTTTGAGAGGTATGGTTCAAGTGGGAGATGTGTGCAGGGGCTTTGGGATTCTGATAGAGATGGTGATTTCAGGAGTAGAGCATATCCAGCTTCAAGCCGATTCAACAGAGTTGGGAGTGACAATTTAAGATGA 1425 0.5025 MGFLRRVFGRKKPDNSSAPSSGSDHKPDNHKRTWSFGKPTKRKSPGSRLSGLHDFDSSTPSSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGTGTGAGAAGTITRPVNATHINSNQRRWVEEVAAVKIQSAFRAYLARRALRALKALVKLQALVRGYIVRKQTAEMLRRMKTLVRLQAKARASRVPLSDSLHSSKSSLFYHPVPEDHERLLHSYSTKFEGSSILKRCSSNANFRDIDPEKAGFGTHWLDRWMEESVWIHPRDASLRNGQTDDEKSDKILEVDTWKPHLSSHRRSSSFHASQYYVASDYNNEMAYESPSKRSAKALNQSLSPRGGLSLSSLKCHKGKELLASRTAENSPQTLYASSRPGSGGRSRRGPFTPARSECSWGFFGGFPGHPSYMANTESSRAKVRSQSAPRQRLEFERYGSSGRCVQGLWDSDRDGDFRSRAYPASSRFNRVGSDNLR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3544 474 ProSiteProfiles IQ motif profile. 155 182 IPR000048 GO:0005515
Bisa03g3544 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 179 IPR027417 -
Bisa03g3544 474 MobiDBLite consensus disorder prediction 1 63 - -
Bisa03g3544 474 MobiDBLite consensus disorder prediction 360 389 - -
Bisa03g3544 474 PANTHER IQ-DOMAIN 5-RELATED 28 447 - -
Bisa03g3544 474 Gene3D - 131 184 - -
Bisa03g3544 474 ProSiteProfiles IQ motif profile. 131 159 IPR000048 GO:0005515
Bisa03g3544 474 Pfam Protein of unknown function (DUF4005) 383 430 IPR025064 -
Bisa03g3544 474 MobiDBLite consensus disorder prediction 362 377 - -
Bisa03g3544 474 Pfam IQ calmodulin-binding motif 155 172 IPR000048 GO:0005515
Bisa03g3544 474 Pfam IQ calmodulin-binding motif 134 152 IPR000048 GO:0005515
Bisa03g3544 474 SMART iq_5 153 174 IPR000048 GO:0005515
Bisa03g3544 474 SMART iq_5 130 152 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3544 Bisa-ChrBisa03 71868189 71873069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3544 1 446 IQD Protein Family AT5G62070 45.495 7.82e-61 202