LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g3535	ATGGAGAGCTATCCCATGTTGTTCCCTTCTGGTTCTTCAAGTCATTCGATGCCGAGGAGTGGTTTTGGGATGGAGGGCCGGATCACAAAGGATGGGTTACAGATGGGATTGTGGGGTGGTGGAACTGGAAGTGACGATCATCGTCAGACGACGTCGCAGGAAAGAGGCGAAGGCGTTAGTGTGAGTGTGAGAAGTGAGGAGAAAGGTGGTTCGGGTAAAAGGAAAAGGGAGAAGAAAGTGAGGAAGCCTCGATATGCTTTCCAAACAAGGAGTCATGTTGATATACTTGATGATGGCTATCGATGGAGAAAATATGGCCAGAAATCTGTCAAAAACAACAAATTCCCAAGGAGCTACTACAGGTGTACGCATCAAGGGTGTAATGTGAAGAAGCAGGTGCAGCGCCTAACAAAAGACGAGGCCGTAGTAGTGACCACTTACGAGGGAGTGCACAGCCATTCAATTGAGAAGACCGTAGACAACTTTGAGCACATTTTGAGTCAGATGCAAATATACACACCCTTCTAG	528	0.4735	MESYPMLFPSGSSSHSMPRSGFGMEGRITKDGLQMGLWGGGTGSDDHRQTTSQERGEGVSVSVRSEEKGGSGKRKREKKVRKPRYAFQTRSHVDILDDGYRWRKYGQKSVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEAVVVTTYEGVHSHSIEKTVDNFEHILSQMQIYTPF	175

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g3535	175	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	49	157	IPR044810	GO:0003700
	Bisa03g3535	175	SMART	WRKY_cls	96	155	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3535	175	FunFam	WRKY transcription factor 57	82	156	-	-
	Bisa03g3535	175	Gene3D	WRKY domain	83	149	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3535	175	Pfam	WRKY DNA -binding domain	97	153	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3535	175	SUPERFAMILY	WRKY DNA-binding domain	88	155	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g3535	175	MobiDBLite	consensus disorder prediction	1	19	-	-
	Bisa03g3535	175	MobiDBLite	consensus disorder prediction	1	83	-	-
	Bisa03g3535	175	ProSiteProfiles	WRKY domain profile.	91	156	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g3535	Bisa-ChrBisa03	71535203	71536313	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g3535	84	175	WRKY Transcription Factor Family	AT5G13080	84.783	5.85e-56	171

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa03g3535		WRKY	3.7e-26	CL0274