Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3533 ATGGAGTTGGAGTCGGAGAAGAAGGAAGCAGCTTCGGGTGAGACTTCCGAGTGGGTAGAGGAATCAGCCGAAAGTACTCGCAAGGACCACACAGGAGACTCGGAATCGGGATCGTCAAAGAGGAGGCGTGCGCAGGACACGTGGTGCTCGGTGGACGGTTGCGATTCTGACATGAGTGGTAGCAGAGAGTATCATCGGCGCCACAGAGCGTGTGAGAAGCACTCCAAAACTGCTGTTGTGTTGATTGGGGAAAAGCAGCAGCGCTTCTGCCAGCAATGCAGCAGATTTCATTCTCTGGGAGAGTTTGATGAGGTCAAGAGGAGTTGCAGGAAACGTCTTGATGGACATAATAGGCGCAGAAGGAAACCTCAGCCACCGTCTCTTTTCATGTCTGCTGACAAACTACTGGGCACTTATAACGGACCTAGAATCCTGCATTTCGGTAGTCCTCAGACATATACCAACCAATTTATGAGAAGTATGTGGCCCGCCACTGCCAAAGCTGGAGCTGAATCTTTGACTGTGAGTTATGACCAACACAGTGTGCTAAGTTCCTCAGCTAATGTCCAGCATCAGCAGGATAAGCAACTTCCTCTCTTGCAAGCAAATGACAATGAAGCATTCTCTGGAGTTTCCATGACCCAACCGGTTTCTGCTGCCATTGCCCCATCAGCAAGTGGAAGGGGAAGCTGGAAGGTCTCTTCTGATTGCCAAGCTGGATCTTATGACCCAGGTTGTGCTCTCTATCTTCTGTCAACACTTCAAACACAAAGTCCTGATCTGAGTTTGGTTCAGTCCACCATAACCAGTCCCATGCAATCTCCATTAGGAGATGTGCATCTTGATGCTGGGGACAAGTACTCATGCTCGGAAAGTTCACAAGAAACCAACCTTCATTACGACGGGATGCTGCATATATGGTCTGACGGAATGGTGGAAAATAGGGACTCCCCGACCAATCCGTTTTTCTGGGAGTAG 978 0.4959 MELESEKKEAASGETSEWVEESAESTRKDHTGDSESGSSKRRRAQDTWCSVDGCDSDMSGSREYHRRHRACEKHSKTAVVLIGEKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPPSLFMSADKLLGTYNGPRILHFGSPQTYTNQFMRSMWPATAKAGAESLTVSYDQHSVLSSSANVQHQQDKQLPLLQANDNEAFSGVSMTQPVSAAIAPSASGRGSWKVSSDCQAGSYDPGCALYLLSTLQTQSPDLSLVQSTITSPMQSPLGDVHLDAGDKYSCSESSQETNLHYDGMLHIWSDGMVENRDSPTNPFFWE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3533 325 Pfam SBP domain 49 122 IPR004333 GO:0003677
Bisa03g3533 325 SUPERFAMILY SBT domain 48 128 IPR036893 GO:0003677|GO:0005634
Bisa03g3533 325 ProSiteProfiles Zinc finger SBP-type profile. 46 123 IPR004333 GO:0003677
Bisa03g3533 325 Gene3D - 45 110 IPR036893 GO:0003677|GO:0005634
Bisa03g3533 325 MobiDBLite consensus disorder prediction 1 44 - -
Bisa03g3533 325 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 14 264 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3533 Bisa-ChrBisa03 71475827 71477352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3533 49 201 SBP-box Gene Family AT5G50670 46.784 3.90e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa03g3533 SBP 1.7e-29 No_clan