Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3525 ATGAGGTATTTCTCCCTGGCAACAGCCCTATTGTGTTTCTTTGTTAAGCTCTCACTCTCTCAGGTCACTTGTAGAAAAATGAAGAAAAGAAGTAAGACTCACAGGTTTGTTCTTCACTTCGAAAGGCAGAGGAATTCAAAAGAGGAGAATGAGGAAATGGGGGCTCTTTTTGGTGACAACGATGAGGTCCACCCCAGAGCTCCAATGGCGACCAGATACTGGGTAGTCTCTCTCCCCGTCCGAAATTCCGCATCTGCTCTTTGGAATCAACTGCAGGAGCAGATCTCCAAGCATTCATTCGATACTCCTCTTTACAGATTCAATATACCTAATCTCCGGGTTGGAACCCTAGATTCTCTCCTCTCTCTCAGCGATGATCTTGTGAAGTCAAACAGTTTCATGGAAGGAGTGTCACACAAGATCAGACGACAGATTGAGGAATTGGAGAGAGTTTCCGGCGTCATGAGCAGTGGGCTGACAGTAGATGGGGTGCCTGTTGATTCGTACTTGACCAGGTTTGTTTGGGATGAGGCTAAGTACCCGACTATGTCACCTTTGAAGGAGATTGTGGATGATATTCATGGTCAGGTGGCAAAGATTGAGGATGACCTCAAGGTTCGTGTTGCTGAGTATAACAATGTCCGCAGTCAGCTAAATGCTATCAACCGAAAGCAAAGTGGAAGCTTAGCTGTTCGTGATCTTTCCAACCTGGTGAAACCAGAGGATATTATAACTTCAGAACACTTGACGACCCTCCTTGCGATTGTTCCTAAGTATTCACAGAAGGATTGGCTCTCATGCTATGAAACATTGACAAGCTATGTGGTACCCAGGTCTTCCAAAAAGTTGTATGAGGATAATGAATATGCTCTTTATACTGTAACACTCTTCAGTCGTGTTGCAGACAATTTTAGAACTAGTGCACGTGAAAGAGGGTTCCAAATTCGAGATTTTGAATACAGTCCTGAAACACATGACAGTCGGAAGCAGGAGTTAGAGAAATTGATGCAAGATCAGGAAACTTTGAGAGGAACCCTGTTGCAATGGTGTTATACAAGTTATGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCTGTACGTGTATTTGCTGAGAGCATTCTTAGATATGGTCTGCCACCATCTTTCTTGGCATCTGTTTTAGCTCCATCTGCAAAACGTGAGAAGAAAGTGCGTTCTATCCTTGAAGGGTTGTCTGATACTGCAAACAGTGCATACTGGAAGACCGAGGATGAAGCTGGAGGGATGGCTGGTCTGGCAGGTGATTCTGATGCCCACCCGTATGTCTCCTTCACTATAAATCTTGTATGA 1332 0.4459 MRYFSLATALLCFFVKLSLSQVTCRKMKKRSKTHRFVLHFERQRNSKEENEEMGALFGDNDEVHPRAPMATRYWVVSLPVRNSASALWNQLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLVKSNSFMEGVSHKIRRQIEELERVSGVMSSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDDIHGQVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLTTLLAIVPKYSQKDWLSCYETLTSYVVPRSSKKLYEDNEYALYTVTLFSRVADNFRTSARERGFQIRDFEYSPETHDSRKQELEKLMQDQETLRGTLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLASVLAPSAKREKKVRSILEGLSDTANSAYWKTEDEAGGMAGLAGDSDAHPYVSFTINLV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3525 443 Gene3D - 109 380 - -
Bisa03g3525 443 FunFam V-type proton ATPase subunit C 231 319 - -
Bisa03g3525 443 Gene3D - 231 319 - -
Bisa03g3525 443 CDD V-ATPase_C 73 440 IPR004907 GO:0033180|GO:0046961|GO:1902600
Bisa03g3525 443 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 70 442 IPR004907 GO:0033180|GO:0046961|GO:1902600
Bisa03g3525 443 Pfam V-ATPase subunit C 73 436 IPR004907 GO:0033180|GO:0046961|GO:1902600
Bisa03g3525 443 Gene3D Vacuolar atp synthase subunit c; domain 1 74 402 - -
Bisa03g3525 443 SUPERFAMILY Vacuolar ATP synthase subunit C 68 442 IPR036132 GO:0015078|GO:0033180|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3525 Bisa-ChrBisa03 71109669 71122743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3525 69 442 Primary Pumps ATPases(2) AT1G12840 82.888 0.0 667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g3525 03 71109669 71122743 Bisa03g3525 03 71109669 71122743 ECH