Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3486 ATGTTGGTGCAGACTGCAGGGTGTGCAACACGTCTCAAACACACAGTGCCGCTGAAGGTGAGCGAAACAGAAATGGGAGAGCAAGGAGCGATGTACGAGTTCCTAACCCAGGCGTCAATGTCATCTTCAAGTTTGAGGAACGGGAAGAAGCCACAGGCGCGTCAAGCTTCCTCATCATCTACCTCTGCTCGCACATTCCAATGCCGTTACTGCCCTCGCAAGTTCTACACCTCCCAAGCGCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGAGAGCGGCCGCTCGCACCACCGCCATGCCCGCGCAACACCAGCATCAGCAGCTCATGCTCCAGCCCCAGCCCCAACCTTCTCATTTCTTCGACCACTATTGCCTTCAGCTTGAACCCACTAATCTTCCTAGTCCTACCACGCCTCCTGCACCTCCTCTTTCCTTTCATGCCGCTTCTTCCACCCCCACGCCTCCTTCTGATGCTGTTGACCCCCTAAACCTTGACCTTACCCTTCGCTTATGA 516 0.564 MLVQTAGCATRLKHTVPLKVSETEMGEQGAMYEFLTQASMSSSSLRNGKKPQARQASSSSTSARTFQCRYCPRKFYTSQALGGHQNAHKRERAAARTTAMPAQHQHQQLMLQPQPQPSHFFDHYCLQLEPTNLPSPTTPPAPPLSFHAASSTPTPPSDAVDPLNLDLTLRL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3486 171 MobiDBLite consensus disorder prediction 144 158 - -
Bisa03g3486 171 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 41 110 IPR044246 GO:0009788
Bisa03g3486 171 SUPERFAMILY beta-beta-alpha zinc fingers 62 93 IPR036236 -
Bisa03g3486 171 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Bisa03g3486 171 Gene3D Classic Zinc Finger 40 120 - -
Bisa03g3486 171 MobiDBLite consensus disorder prediction 131 165 - -
Bisa03g3486 171 MobiDBLite consensus disorder prediction 81 105 - -
Bisa03g3486 171 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Bisa03g3486 171 MobiDBLite consensus disorder prediction 42 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3486 Bisa-ChrBisa03 69786694 69787209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3486 62 96 C2H2 Transcription Factor Family AT5G14010 88.571 6.98e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g3486 None None None