Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3481 ATGTTTCGAGCTTACCCATCACCATCTGATCAGACCCAACAGGAGGAAACTTCGCCTTCACCCTCTCGCTTTTCGTATCTTATCAGCACCAGTGATACTAATACCACCTTCTCAATCCCAATCTCACATGGCCAAGTAAGCGACTCGTCTGGATTGATTCAGAAGCAGGATCCGTCCCAGCTAACGCAACATCAAGGCATAACTGTGAGGAAAAGAAACTATAGAGGAGTGAGACAGAGACCATGGGGGAAATGGGCAGCCGAAATCCGAGACCCGATAAAGGCAGCTAGAGTGTGGCTTGGAACCTTTGAGACGGCGGAAGACGCAGCCGCTGCTTATGATGCTGCAGCCTTGAAGTTCAAAGGAAACAAAGCCAAGCTCAACTTCCCCGAACGTGTTGCTTCAGCCACTGCACAAAGCCTTGAAGATCAGGCTGCTGCTCCGTCAACAGTAGTGCCGCCATACGAGGCGGCGCAACCGCCTCTTGGGGCCCTCCCTTTATCGGAGGAAGGGTTCCCTAACCTCTTGCACTACGCGCAGCTGCTTTGTGGTGATGATGATGATCTACGAAGAGCTGCTTCGGGACTTTATAATAATTATTCTTCTTTCTTTTCATCATCGGCAATGTCTTCTTCGTCTGCTTCTATGTCTCTGTCTGATCAGCAGCAGGTCCAAGGTATGCAGAGTTCACGAAAGGGAGATTATGGTTCTTATTTTTTTGACGAAAAGAACACGAAAGGATAG 744 0.4906 MFRAYPSPSDQTQQEETSPSPSRFSYLISTSDTNTTFSIPISHGQVSDSSGLIQKQDPSQLTQHQGITVRKRNYRGVRQRPWGKWAAEIRDPIKAARVWLGTFETAEDAAAAYDAAALKFKGNKAKLNFPERVASATAQSLEDQAAAPSTVVPPYEAAQPPLGALPLSEEGFPNLLHYAQLLCGDDDDLRRAASGLYNNYSSFFSSSAMSSSSASMSLSDQQQVQGMQSSRKGDYGSYFFDEKNTKG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3481 247 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Bisa03g3481 247 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Bisa03g3481 247 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Bisa03g3481 247 MobiDBLite consensus disorder prediction 215 232 - -
Bisa03g3481 247 MobiDBLite consensus disorder prediction 1 27 - -
Bisa03g3481 247 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Bisa03g3481 247 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Bisa03g3481 247 MobiDBLite consensus disorder prediction 215 247 - -
Bisa03g3481 247 CDD AP2 73 131 IPR001471 GO:0003700|GO:0006355
Bisa03g3481 247 MobiDBLite consensus disorder prediction 47 66 - -
Bisa03g3481 247 PANTHER DNA-BINDING DOMAIN 25 212 IPR044808 GO:0003700|GO:0009873
Bisa03g3481 247 Gene3D AP2/ERF domain 72 132 IPR036955 GO:0003700|GO:0006355
Bisa03g3481 247 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
Bisa03g3481 247 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3481 Bisa-ChrBisa03 69496996 69498358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3481 53 197 AP2-EREBP Transcription Factor Family AT5G13330 52.318 3.75e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g3481 AP2 1e-13 CL0081