Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3475 ATGGTCTCAAAAAACCCAAACCCGCCAGAGGGCTTCTACTTGGATCCCACTGGCATGGCGCTTCCTGGACTTGGCCCCTTCACCTCAGTCACCGCTGCCACCACCACCGCGACGGCGTCCACCATCAATGCCTCCGACGACGCTGCCAAGAAGATCCGCAAACCATACACTATTACCAAGTTCAGGGAAAGCTGGACTGAACCCGAGCACGACAAATTCCTTGAAGCCCTTCAACTCTTTGATCGCGACTGGAAAAAAATAGAAGCATTTGTTGGATCTAAGACAGTTATACAGATACGTAGCCATGCACAGAAATACTTTCTCAAAGTTCAGAAGAGTGGGGCTACTGAACATCTACCTCCACCAAGGCCAAAAAGAAAAGCTGCTCATCCATATCCTCAAAAAGCTTCTAAAAATGCTCCAGTTGGCTCACAGGTATCAGGATCCTTTCAATCTTCGCCAGCTTTGCTTGAACCTGGATATAACCTAAAGCCAGATTCCTCGGCAATGCTTAAAACTCCTACTATTAACACTACAATGTCTTCCTCGTCAAATAACACCTTGCAAACTGCCAATGTACTGCCTGGGCCAAGAGTGACTAATTCTTGCTGCAGCAGTGAAAGCATCCCTAAAGCACGGCCTGTTTGTGAAACTACTATTCTTCCAGATTTTGCACAAGTGTACAGCTTTATTGGCAGTGTGTTTGACCCAAATGTAGCTGGGCATCTACAAAAATTAAAAAGAATGGATCCAATTGATGTTGAGACGGTGCTACTGTTGATGAGAAACTTGTCTATCAATCTAACTAGCCCAGATTTTGAGGATCATAGGAGGAGGATTTCGTCCTATGAGGCAGGACTGGAGACAAATTACCTTGATGCTGATGAAGTCATGCACGATGAGCAGCTACAGTGTCAGACCGAATCTCGACTCCCTATTGAGCAATCAATGAACTCTCCCAGATATTTAACTAGGCTTTCTATCTCTTTGCACTCTGCACGAGATAGTTTTACTTAA 1017 0.4523 MVSKNPNPPEGFYLDPTGMALPGLGPFTSVTAATTTATASTINASDDAAKKIRKPYTITKFRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGATEHLPPPRPKRKAAHPYPQKASKNAPVGSQVSGSFQSSPALLEPGYNLKPDSSAMLKTPTINTTMSSSSNNTLQTANVLPGPRVTNSCCSSESIPKARPVCETTILPDFAQVYSFIGSVFDPNVAGHLQKLKRMDPIDVETVLLLMRNLSINLTSPDFEDHRRRISSYEAGLETNYLDADEVMHDEQLQCQTESRLPIEQSMNSPRYLTRLSISLHSARDSFT 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3475 338 FunFam protein REVEILLE 6 isoform X1 64 112 - -
Bisa03g3475 338 MobiDBLite consensus disorder prediction 113 151 - -
Bisa03g3475 338 NCBIfam myb-like DNA-binding domain, SHAQKYF class 60 109 IPR006447 GO:0003677
Bisa03g3475 338 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Bisa03g3475 338 Gene3D - 65 112 - -
Bisa03g3475 338 PANTHER SWI/SNF COMPLEX-RELATED 33 269 - -
Bisa03g3475 338 SUPERFAMILY Homeodomain-like 56 112 IPR009057 -
Bisa03g3475 338 SMART sant 61 109 IPR001005 -
Bisa03g3475 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 111 IPR017930 -
Bisa03g3475 338 CDD SANT 64 107 IPR001005 -
Bisa03g3475 338 ProSiteProfiles SANT domain profile. 60 111 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3475 Bisa-ChrBisa03 69190095 69216631 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa03g3475 Myb_DNA-binding 4.3e-10 CL0123