Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3473 ATGGCGTTTGATCCCGACCTCCGAGAGAGTTTTCCCATAATTTCTCAGCTTTTCCCTGAAAATCCCCCAAAACCACAAGAGTACTTCTCACCCTCACTCACCCCTTCCCCTATGGTGTCTTTACGAACCTCCTCCTGCGATTACCCTCCGACGTCGTCTCAGACCAGTCATAATTTCCAGTTCCGCCATTTTCCGCAGCATCCCCAACTGAACCTGAATCGATCAAATCCGAACCTGGTTTTTCTGAAGGAACGTCCATCTTCTTCGTCTATCGCCTTTTCTCCTCCGAGTGCTTCTTCTTACACAAATAATAATGCGTCCTCTGGAGATTTCGCCAATACTTACTACCTTTCACCACACAACAAAATGGATACTTTGTGGGATTTGTCCCACAAGCTCTCACTCCCATCTGGAGCCCCGGCCCCAATGGGCCCATCCCCGTCATTACTTTACCGTCAAGCTTATGGGCCACCGCTGAAACCTAGGCTTCAAGATGAACGGCTCTCATGCTTCCTGAAGAATAATGGATGGGAGAAGGACGAGGGTGATGATCAGAGAAGCAATGACGAGAAGAAGAAGAAGGTACAGACGCACAAGAGCGCTCAGAAGAACACCAACATCATCAAGGGTCAGTGGACACCCAAAGAGGACAGGTTGCTGGTGCAATTGGTGGAACGATTTGGAGTTAAGAGATGGTCGCAAGTTGCCAAGATTCTGAGTGGGAGGGTAGGAAAGCAGTGTAGGGAGAGATGGCACAACCATCTACGTCCGGACATTCGGAAGGGGGCATGGACAGAGGAAGAAGATAAGATCCTAATCGAAGCGCATAAAGAATTAGGGAACAAGTGGGCAGAAATCGCACGGAGGCTGGTGGGAAGGTCAGAGAACACTGTGAAGAACCACTGGAACGCCACAAAACGCCGCAAGAACGCCAAGAAACAGAGGATCAGGGCCTCCACTTCTACGACTTCGTCCAAACTGCTTCAGGACTACATCAGGCAAGTCACACACCAAGCCCAAGCCCAGGCCCACAATTATAATCGCAATGATGGGAAGGCCGTCGAAGTCCGCAGCGGAATCGCCTTAGACAATGACGACGACGACAGTACTAGCCCTGAGGACTGGGAGATCCCGGACGAGGAGGCTGGAGAAGAAGAAGAAGAAGAAGAAAAAGAAAATGAAGAGGAAGAAGAGGAAGAGAAGAAGGTAAATGATGCTGATGCTGATGCTCAAGCTGAGATGAACAACGAAATGGATCTGATGGAGATGATCGGTGGGAATAGGAAGTAA 1290 0.4961 MAFDPDLRESFPIISQLFPENPPKPQEYFSPSLTPSPMVSLRTSSCDYPPTSSQTSHNFQFRHFPQHPQLNLNRSNPNLVFLKERPSSSSIAFSPPSASSYTNNNASSGDFANTYYLSPHNKMDTLWDLSHKLSLPSGAPAPMGPSPSLLYRQAYGPPLKPRLQDERLSCFLKNNGWEKDEGDDQRSNDEKKKKVQTHKSAQKNTNIIKGQWTPKEDRLLVQLVERFGVKRWSQVAKILSGRVGKQCRERWHNHLRPDIRKGAWTEEEDKILIEAHKELGNKWAEIARRLVGRSENTVKNHWNATKRRKNAKKQRIRASTSTTSSKLLQDYIRQVTHQAQAQAHNYNRNDGKAVEVRSGIALDNDDDDSTSPEDWEIPDEEAGEEEEEEEKENEEEEEEEKKVNDADADAQAEMNNEMDLMEMIGGNRK 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3473 429 Gene3D - 262 333 - -
Bisa03g3473 429 MobiDBLite consensus disorder prediction 175 209 - -
Bisa03g3473 429 CDD SANT 263 306 IPR001005 -
Bisa03g3473 429 Coils Coil 377 416 - -
Bisa03g3473 429 MobiDBLite consensus disorder prediction 366 403 - -
Bisa03g3473 429 PANTHER MYB PROTEIN-RELATED 197 367 - -
Bisa03g3473 429 CDD SANT 212 255 IPR001005 -
Bisa03g3473 429 MobiDBLite consensus disorder prediction 361 429 - -
Bisa03g3473 429 Gene3D - 208 260 - -
Bisa03g3473 429 SUPERFAMILY Homeodomain-like 206 302 IPR009057 -
Bisa03g3473 429 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 259 IPR017930 -
Bisa03g3473 429 ProSiteProfiles Myb-like domain profile. 256 306 IPR001005 -
Bisa03g3473 429 SMART sant 208 257 IPR001005 -
Bisa03g3473 429 SMART sant 260 308 IPR001005 -
Bisa03g3473 429 MobiDBLite consensus disorder prediction 304 324 - -
Bisa03g3473 429 MobiDBLite consensus disorder prediction 175 196 - -
Bisa03g3473 429 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 260 310 IPR017930 -
Bisa03g3473 429 ProSiteProfiles Myb-like domain profile. 204 255 IPR001005 -
Bisa03g3473 429 FunFam Transcriptional activator Myb isoform A 208 260 - -
Bisa03g3473 429 Pfam Myb-like DNA-binding domain 212 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3473 Bisa-ChrBisa03 69073265 69076190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3473 203 339 MYB Transcription Factor Family AT4G18770 59.124 8.97e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g3473 Myb_DNA-bind_6 6.3e-18 CL0123