Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3461 ATGGGAAAAGAGCACAAGATAGCCATGGAAATTGCGGTTCGAGACTTCAATCGCTTGAGAATGAGATCTTCTAAGCTGCTTTTGAATTTTCACGACTCCCGCGGAAATTCGGCTACAACTGTTGCTGCCGCTATGGATCTCGCACTCGGCAAGCAAGTGGCAGCCATCGTAGGAACGATAACACACAACGAGGCAATTCTGGCAATTGAAAATAAAAACACCAACAAGAACCTTCTCATCTTATCTCTCACTTCGCCCGCAGTGAGCACAGAGTCCCTTTCAATTCGATTGCCATACTTCATTCAAGAGGGCACCGATATCATCCTTCACATTCGATGCTTCGCCGCCATTGTTGGGGAATTCAGGTTTCCAAAAGTGACGGCAATCTACGAACACAATAACGGGTTTTCCTCTGATCCAGGGATACTAACTCTCCTTTCTTATTCTCTTCGACTTGTTGGTTCTAAGATTGATGACCATTTAGCTTTGCCTCCACTGTCTTCTCTATCAAACCCAAAATTTACTATTGAAAAGGAGCTTAGCAGGCTCAGGAGCAATAGCAACAGGGTGTTCTTGATTGTGCAATCTTCCTTAGAGATGGCGAGTTTGCTTTTTGAGAAGGCAAAGCGGATGGGTATGATGGAGAAAGGATCGGTTTGGATTGTAGCCGACGAGGTTGCTGGTCTCATTGATTCAGTCAATTCCTCTGTTATTCTCGACATGCGAGGTGTTATTGGATTTAGAACTCACTTCAATGAAATAAGCGAGACACTCAGACAATTCAATTTCAAATTTCGAAGAAAATTTGCGTTAGATTACCCTGAAGAAGCGAACCCTAACCCAAGCATCTTTGCACTTCGATCATACGATGCAACTTGGGCAATTGCTCAGGCAGCAAAGGTGTCACAAGGAAAATTCTCCCAAAAAGAATTTTCAGAACGGATTCTGGCCAATAATTTTGAGGGACTAAGTGGCAAGTTTGGCCTAAAAAATGGAACAACATTGCGAGCACAAGTGTTTAAAATAATTAATGTGATCGGGAAAAGCTATGTAGATTTGGCAGTTTGGTCTCCGGCATTTGGTTTCTCCAAGAACCTTGTCACACATCAGCTGATGGACATGGCTACAAGTAATGGTTCCCCGGGAGATTTAGGTTCTGTTTATTGGCCAAGGGGCTTACTCTGGATTCCAAATGAGGAAAGAACATTGAAAATTGGTGTGCCGGCAAAAGGTGCCTTCACCCAATTTGTGAATGTGACTTATGATCAGAGCCGGAATGAAACTTCCATCACAGGTTTCTCAATTGATGTCTTCAAAGCTGCTGTTAAACGCCTTCCTTATCACTTGCAATATGTGTTTGTCCCCTTCAATGGCTCTTATGATGAAATGGTTGAGCAAGTCTACAAGAAGGACCTGGATGCTGCTGTTGGAGATACAGAGATTATGGCATATAGATATCGTTATGTATTATTTTCTCAACCATATGTTGAATCTGGCCTCGACATGGTAGTAACTGTGAAGCCCAACAAATCAAAAGAAACATGGATGTTTACGAATGCATTCACAAAAGAGATGTGGCTAATGATGGCAGCAATGCATATTTTCATTGGATTTTTCATTTGGCTGATGGAACGGCAAGTTAACGAACAACTGAGGGGGCTTGGGGCTATGCTTTGGTTTTTAGTCACTGTACTCTTCTATGCACACAGAGAACCAATAAGACATCCTTTGGCTCGAATTGTGTTGGCACCTTGGTTATTTATAATTCTTATAGTTACGACAAGTTTTACGGCAAGTTTAACATCCATGATGACTACCAGGCAACTTGAACCATCGGTGTTAGATATCGAAACCCTTAAGAGGACAAATGCTCCTGTTGGATGTAATGGAAATTCATTTATTGTGAATTATTTGACAGAGGTACTAAAATTCAAACATAAGAACATTCGTAGAATTGATTCCATAAGTGACTACCCTACGGCCTTTAAGAACAGGGATATTGAAGCAGCTTTCTTTACTGCTCCACATGCTAAAGTCTTCCTAGCTAAGTACTCATGCACAGGCTACATCAAAGCAGGGGACACTTTCAAGCTTGGAGGCTTTGGCTTTGTCTTTCCAAAGGGTTCCAAGCTGGCTGGTGACATATCAGAGGCAGTGTTGGATGTTATAGAGAGTGGAGAAACACAACAGCTAGAAGACGATATGATATCCACTGTCAGTTGCTCCTCTTCGGAAAGCAAGACCCAACAAGAAGATGGATCATTAGGTGTTCAGCCTTTCCTCGGCCTATTTTGCATTTCTGCAACTATTGCTGTCCTTGCATGGTTATATTCCATCAAGGGTTTGGTGGTAAGCAAATTGGAGATGAACCACGCACAAGAAACATTTTCACATTTCAGGATACTATGGAGATGGGCAAGAGAGCTTGTGGCTCAAACTTATTCAAAATTCAAAATTAGGATCATGAGAAACAGTACTGCATCGGAATTAAATAATCCAGAGGAAACAACCTCTAATAATGAGCAACACCCAACGGGTTCTGAGCTTGTTCGTGTAGTAATGATTCCTCATGGCCCCAACTAA 2583 0.4208 MGKEHKIAMEIAVRDFNRLRMRSSKLLLNFHDSRGNSATTVAAAMDLALGKQVAAIVGTITHNEAILAIENKNTNKNLLILSLTSPAVSTESLSIRLPYFIQEGTDIILHIRCFAAIVGEFRFPKVTAIYEHNNGFSSDPGILTLLSYSLRLVGSKIDDHLALPPLSSLSNPKFTIEKELSRLRSNSNRVFLIVQSSLEMASLLFEKAKRMGMMEKGSVWIVADEVAGLIDSVNSSVILDMRGVIGFRTHFNEISETLRQFNFKFRRKFALDYPEEANPNPSIFALRSYDATWAIAQAAKVSQGKFSQKEFSERILANNFEGLSGKFGLKNGTTLRAQVFKIINVIGKSYVDLAVWSPAFGFSKNLVTHQLMDMATSNGSPGDLGSVYWPRGLLWIPNEERTLKIGVPAKGAFTQFVNVTYDQSRNETSITGFSIDVFKAAVKRLPYHLQYVFVPFNGSYDEMVEQVYKKDLDAAVGDTEIMAYRYRYVLFSQPYVESGLDMVVTVKPNKSKETWMFTNAFTKEMWLMMAAMHIFIGFFIWLMERQVNEQLRGLGAMLWFLVTVLFYAHREPIRHPLARIVLAPWLFIILIVTTSFTASLTSMMTTRQLEPSVLDIETLKRTNAPVGCNGNSFIVNYLTEVLKFKHKNIRRIDSISDYPTAFKNRDIEAAFFTAPHAKVFLAKYSCTGYIKAGDTFKLGGFGFVFPKGSKLAGDISEAVLDVIESGETQQLEDDMISTVSCSSSESKTQQEDGSLGVQPFLGLFCISATIAVLAWLYSIKGLVVSKLEMNHAQETFSHFRILWRWARELVAQTYSKFKIRIMRNSTASELNNPEETTSNNEQHPTGSELVRVVMIPHGPN 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3461 860 FunFam Glutamate receptor 398 513 - -
Bisa03g3461 860 MobiDBLite consensus disorder prediction 828 846 - -
Bisa03g3461 860 SMART GluR_14 402 738 IPR001320 GO:0015276|GO:0016020
Bisa03g3461 860 SUPERFAMILY Periplasmic binding protein-like I 5 357 IPR028082 -
Bisa03g3461 860 Gene3D - 604 699 - -
Bisa03g3461 860 Gene3D - 398 525 - -
Bisa03g3461 860 Pfam Ligand-gated ion channel 734 768 IPR001320 GO:0015276|GO:0016020
Bisa03g3461 860 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 830 IPR015683 -
Bisa03g3461 860 Gene3D - 1 107 - -
Bisa03g3461 860 PIRSF IGluLR_plant 1 852 IPR017103 -
Bisa03g3461 860 Gene3D - 700 731 - -
Bisa03g3461 860 FunFam Glutamate receptor 110 279 - -
Bisa03g3461 860 Pfam Receptor family ligand binding region 7 344 IPR001828 -
Bisa03g3461 860 Gene3D - 110 275 - -
Bisa03g3461 860 SUPERFAMILY Periplasmic binding protein-like II 395 733 - -
Bisa03g3461 860 CDD GluR_Plant 401 736 - -
Bisa03g3461 860 FunFam Glutamate receptor 514 647 - -
Bisa03g3461 860 MobiDBLite consensus disorder prediction 828 849 - -
Bisa03g3461 860 Pfam Bacterial extracellular solute-binding proteins, family 3 427 733 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3461 Bisa-ChrBisa03 68347338 68352900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3461 8 769 Ion Channels AT2G29100 33.292 1.04e-113 368