Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3459 ATGCAGTTTCGACAGGGCACACTGCCATGCGCTGCATGTGTGATTTATGGGTATCTTGTGTGTGCCACATATGACTACATAGGTTTTGGCATTTTTTGTGAGGAGGAAGTTGATTCACTGGATAATAGTATTGCCTATTGGAGGAAATTTGTGGCTGAATATTACTCTCCACTTGCAAAGAAACGGTGGTGCTTGTCGTTGTATGATAATATTGGGCATCATGCACTTGGTGTTTCCCCCCAAGCAGTTATGGATGCATGGCAATGCGAAATATGTCATTCTAAATCTGGAAGGGGATTTGGTAGATTTCCATCAGGTATGATGGTGTTAGAATATGGAAAAGCTGTGCAAGAGAGTGTGTATGAGCAGCTTCGTGTTGTTCATGAAGGTCAACTTCGTGTTATATTCACCCAAGACTTGAAGATTTTATCTTGGGAATTTTGTGTAAGGCACCATGAAGAACTTCTTCCTAGAAGATTGGTTGCACCGCAGGTCAACCAGTTGGTTCAGGTAGCAAAAAAGTGTCAGAGTACAATTGCTGAAAGTGGATCTGATGGGATTTCTCAGCAGGACTTGCAGACAAATAGCAATATGGTGTTGACAGCTGGGCGTCAGCTTGCCAAGAGTTTGGAGTTGCAGTCACTTAATGATTTGGGTTTTTCCAAAAGATATGTGAGATGTTTGCAGATATCTGAGGTTGTAAATAGCATGAAAGATCTGATTGATTTCTGTCGGGAGCACAAAATTGGGGCGATTGAGGGTTTGAAAAATTATCCTCGGCATGCGAATGTGGCCAAACTCCAGTTGCAAAAGATGCAGGATATGGAACAGCTTCCAAGAGTTCAAGGTCTGCCAACTGATCGAAACACACTTAATAAGCTGATGGGATTTCATCCTGGGTTGAACAACCAAATGAACAATAATCATAATATAGTTAATCGCAGTGCTTTAAGTGGGTCAGCACAAGCTGCTTTGGCATTGACTAACTACCAGAATCTTCTCATTAGGCAGAATTCGATGAATTCAAATTCTAACTCATTCCAGCGAGAAGCATCCTCTTCCTTCAATAATTCAGCAGAGAGTCCATCTTCAACCATGCAAGTTTCTGCTGCTGCTTTAATTCCAGGCTCCATGCAGAATTTTCCTGTCAGTGGTCTCTCAAGTCGCCATCTACCCCAACAGCAGCAACATCAACTGCAACAACTTCAACAGTGCTCATTAAGTGCAAATAACCTGGTTCAACAAAGCCATCCACAGGGCTCTGAAGGAAATCAAGCTCTACGGCAACAGATGTTCCAGCGTCTGCTGCAGGAGGTGTCAAATGGTAGTGGGAGTGGAATGAAACTACAGCCCCTTGCTGGACCCAATGCAAATAGGAGTATCGAAATGAATGGGTTGGGTTTCGGAGGCTGTTCACCAGTAACTGGAGGCAGTGCCAATGTTTTAGGAAGCAACGGAACTGCTCCCAGCAGGAGCAACAGTTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCGGCTGGTGGCAACAGCGGATTCAGCCCGAGACCTTCTGATATGCCACAGAATCTCCATTTACAGGAAGATGTGGTTCCAGATATCGCGCATGAGTTAGCGGATAATGGCTTCTTTAACAGTGATCTAGAAGAGAACGTGGGTTATGACTGGAAGGCATGA 1674 0.4403 MQFRQGTLPCAACVIYGYLVCATYDYIGFGIFCEEEVDSLDNSIAYWRKFVAEYYSPLAKKRWCLSLYDNIGHHALGVSPQAVMDAWQCEICHSKSGRGFGRFPSGMMVLEYGKAVQESVYEQLRVVHEGQLRVIFTQDLKILSWEFCVRHHEELLPRRLVAPQVNQLVQVAKKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREHKIGAIEGLKNYPRHANVAKLQLQKMQDMEQLPRVQGLPTDRNTLNKLMGFHPGLNNQMNNNHNIVNRSALSGSAQAALALTNYQNLLIRQNSMNSNSNSFQREASSSFNNSAESPSSTMQVSAAALIPGSMQNFPVSGLSSRHLPQQQQHQLQQLQQCSLSANNLVQQSHPQGSEGNQALRQQMFQRLLQEVSNGSGSGMKLQPLAGPNANRSIEMNGLGFGGCSPVTGGSANVLGSNGTAPSRSNSFKAASNSDSSAAGGNSGFSPRPSDMPQNLHLQEDVVPDIAHELADNGFFNSDLEENVGYDWKA 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3459 557 PANTHER LIM DOMAIN-BINDING PROTEIN 102 543 IPR029005 -
Bisa03g3459 557 Pfam LIM-domain binding protein 41 255 IPR029005 -
Bisa03g3459 557 MobiDBLite consensus disorder prediction 343 363 - -
Bisa03g3459 557 MobiDBLite consensus disorder prediction 482 520 - -
Bisa03g3459 557 MobiDBLite consensus disorder prediction 482 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3459 Bisa-ChrBisa03 68314705 68326112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g3459 41 262 C2H2 Transcription Factor Family AT1G43850 51.383 3.35e-77 259